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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036920
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.914s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0129500.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20774417 20780508 +
3 domain predictions
3 GO terms
LotjaGi1g1v0129500.2
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|P93847|RL10_SOLME 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776312 +
3 domain predictions
3 GO terms
LotjaGi1g1v0129500.3
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776544 +
3 domain predictions
3 GO terms
LotjaGi1g1v0129500.4
n.a. 60s ribosomal protein; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0129500 LjG1.1_chr1 20775346 20776544 +
3 domain predictions
3 GO terms
LotjaGi1g1v0304700.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74343504 74346300 +
3 domain predictions
3 GO terms
LotjaGi1g1v0304700.2
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|A0A059A885|A0A059A885_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74344314 74345093 +
3 domain predictions
3 GO terms
LotjaGi1g1v0304700.3
n.a. 50S ribosomal protein L16; TAIR: AT1G26910.2 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I3SEG3|I3SEG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0304700 LjG1.1_chr1 74344314 74345570 +
3 domain predictions
3 GO terms
LotjaGi3g1v0227900.1
n.a. 50S ribosomal protein L16, chloroplastic; TAIR: ATCG00790.1 ribosomal protein L16 (ChrC); Swiss-Prot: sp|Q9BBP9|RK16_LOTJA 50S ribosomal protein L16, chloroplastic; TrEMBL-Plants: tr|I3S6T0|I3S6T0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0227900 LjG1.1_chr3 35474972 35475379 +
3 domain predictions
3 GO terms
LotjaGi3g1v0227900.2
n.a. 50S ribosomal protein L16, chloroplastic; TAIR: ATCG00790.1 ribosomal protein L16 (ChrC); Swiss-Prot: sp|Q9BBP9|RK16_LOTJA 50S ribosomal protein L16, chloroplastic; TrEMBL-Plants: tr|A0A067KET2|A0A067KET2_JATCU Uncharacterized protein; Found in the gene: LotjaGi3g1v0227900 LjG1.1_chr3 35474972 35475763 +
3 domain predictions
3 GO terms
LotjaGi3g1v0227900.3
n.a. 50S ribosomal protein L14, chloroplastic; TAIR: ATCG00780.1 ribosomal protein L14 (ChrC); Swiss-Prot: sp|Q9BBQ0|RK14_LOTJA 50S ribosomal protein L14, chloroplastic; TrEMBL-Plants: tr|M7ZR36|M7ZR36_TRIUA 50S ribosomal protein L14, chloroplastic; Found in the gene: LotjaGi3g1v0227900 LjG1.1_chr3 35475020 35475826 +
2 domain predictions
3 GO terms
LotjaGi6g1v0045500.1
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|I1MZN4|I1MZN4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8492796 8501311 +
3 domain predictions
3 GO terms
LotjaGi6g1v0045500.2
n.a. Ribosomal protein; TAIR: AT1G66580.1 senescence associated gene 24; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|F6GU72|F6GU72_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495096 +
3 domain predictions
3 GO terms
LotjaGi6g1v0045500.3
n.a. Ribosomal protein; TAIR: AT1G26910.1 Ribosomal protein L16p/L10e family protein; Swiss-Prot: sp|P93847|RL10_SOLME 60S ribosomal protein L10; TrEMBL-Plants: tr|A0A067EUN1|A0A067EUN1_CITSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495275 +
3 domain predictions
3 GO terms
LotjaGi6g1v0045500.4
n.a. Ribosomal protein; TAIR: AT1G66580.1 senescence associated gene 24; Swiss-Prot: sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10; TrEMBL-Plants: tr|W9RLX2|W9RLX2_9ROSA 60S ribosomal protein L10; Found in the gene: LotjaGi6g1v0045500 LjG1.1_chr6 8494390 8495275 +
3 domain predictions
3 GO terms