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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036975
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.878s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0336300.1
n.a. Importin subunit alpha; TAIR: AT4G16143.1 importin alpha isoform 2; Swiss-Prot: sp|F4JL11|IMPA2_ARATH Importin subunit alpha-2; TrEMBL-Plants: tr|I1L0U6|I1L0U6_SOYBN Importin subunit alpha; Found in the gene: LotjaGi4g1v0336300 LjG1.1_chr4 71660209 71665579 +
2 domain predictions
1 GO term
LotjaGi4g1v0336300.3
n.a. Importin subunit alpha; TAIR: AT4G16143.1 importin alpha isoform 2; Swiss-Prot: sp|F4JL11|IMPA2_ARATH Importin subunit alpha-2; TrEMBL-Plants: tr|I1L0U6|I1L0U6_SOYBN Importin subunit alpha; Found in the gene: LotjaGi4g1v0336300 LjG1.1_chr4 71660337 71664938 +
2 domain predictions
1 GO term
LotjaGi5g1v0228400.1
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q96321|IMPA1_ARATH Importin subunit alpha-1; TrEMBL-Plants: tr|G7I9F7|G7I9F7_MEDTR Importin subunit alpha; Found in the gene: LotjaGi5g1v0228400 LjG1.1_chr5 53554108 53559221 -
2 domain predictions
1 GO term
LotjaGi5g1v0228400.2
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a; TrEMBL-Plants: tr|G7I9F7|G7I9F7_MEDTR Importin subunit alpha; Found in the gene: LotjaGi5g1v0228400 LjG1.1_chr5 53554868 53559042 -
2 domain predictions
1 GO term
LotjaGi5g1v0228400.3
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q96321|IMPA1_ARATH Importin subunit alpha-1; TrEMBL-Plants: tr|G7I9F7|G7I9F7_MEDTR Importin subunit alpha; Found in the gene: LotjaGi5g1v0228400 LjG1.1_chr5 53554868 53559042 -
2 domain predictions
1 GO term
LotjaGi5g1v0228400.5
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a; TrEMBL-Plants: tr|G7I9F7|G7I9F7_MEDTR Importin subunit alpha; Found in the gene: LotjaGi5g1v0228400 LjG1.1_chr5 53555096 53559042 -
2 domain predictions
1 GO term
LotjaGi6g1v0255500.1
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q96321|IMPA1_ARATH Importin subunit alpha-1; TrEMBL-Plants: tr|I1MGI7|I1MGI7_SOYBN Importin subunit alpha; Found in the gene: LotjaGi6g1v0255500 LjG1.1_chr6 56823598 56828748 -
2 domain predictions
1 GO term
LotjaGi6g1v0255500.2
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q96321|IMPA1_ARATH Importin subunit alpha-1; TrEMBL-Plants: tr|I1MGI7|I1MGI7_SOYBN Importin subunit alpha; Found in the gene: LotjaGi6g1v0255500 LjG1.1_chr6 56824749 56828363 -
2 domain predictions
1 GO term
LotjaGi6g1v0255500.4
n.a. Importin subunit alpha; TAIR: AT3G06720.1 importin alpha isoform 1; Swiss-Prot: sp|Q96321|IMPA1_ARATH Importin subunit alpha-1; TrEMBL-Plants: tr|I1MGI7|I1MGI7_SOYBN Importin subunit alpha; Found in the gene: LotjaGi6g1v0255500 LjG1.1_chr6 56824820 56828363 -
2 domain predictions
1 GO term
LotjaGi6g1v0255500.5
n.a. Importin subunit alpha; TAIR: AT4G16143.1 importin alpha isoform 2; Swiss-Prot: sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a; TrEMBL-Plants: tr|I1MGI7|I1MGI7_SOYBN Importin subunit alpha; Found in the gene: LotjaGi6g1v0255500 LjG1.1_chr6 56824826 56828363 -
2 domain predictions
1 GO term