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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037256
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.188s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0004800.1
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT4G16360.1 SNF1-related protein kinase regulatory subunit beta-2; Swiss-Prot: sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2; TrEMBL-Plants: tr|K7KBS0|K7KBS0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004800 LjG1.1_chr1 821642 824555 -
2 domain predictions
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LotjaGi1g1v0004800.2
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT4G16360.1 SNF1-related protein kinase regulatory subunit beta-2; Swiss-Prot: sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2; TrEMBL-Plants: tr|A0A0L9UUZ6|A0A0L9UUZ6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0004800 LjG1.1_chr1 821669 824644 -
2 domain predictions
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LotjaGi1g1v0055200.1
n.a. SNF1-related protein kinase regulatory subunit beta-1; TAIR: AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit protein; Swiss-Prot: sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1; TrEMBL-Plants: tr|A0A151U1N8|A0A151U1N8_CAJCA SNF1-related protein kinase regulatory subunit beta-1; Found in the gene: LotjaGi1g1v0055200 LjG1.1_chr1 7788891 7794772 -
2 domain predictions
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LotjaGi3g1v0487800.1
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT2G28060.1 5'-AMP-activated protein kinase beta-2 subunit protein; Swiss-Prot: sp|Q9ZUU8|KINB3_ARATH SNF1-related protein kinase regulatory subunit beta-3; TrEMBL-Plants: tr|I3SNK1|I3SNK1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0487800 LjG1.1_chr3 90534511 90537229 -
2 domain predictions
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LotjaGi6g1v0283000.1
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT4G16360.1 SNF1-related protein kinase regulatory subunit beta-2; Swiss-Prot: sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2; TrEMBL-Plants: tr|I1MFR8|I1MFR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0283000 LjG1.1_chr6 59972226 59977449 +
2 domain predictions
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LotjaGi6g1v0283000.2
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT4G16360.1 SNF1-related protein kinase regulatory subunit beta-2; Swiss-Prot: sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2; TrEMBL-Plants: tr|I1MFR8|I1MFR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0283000 LjG1.1_chr6 59972678 59975711 +
2 domain predictions
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LotjaGi6g1v0283000.3
n.a. SNF1-related protein kinase regulatory subunit beta-2; TAIR: AT4G16360.1 SNF1-related protein kinase regulatory subunit beta-2; Swiss-Prot: sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2; TrEMBL-Plants: tr|I3S3S8|I3S3S8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0283000 LjG1.1_chr6 59973319 59976002 +
2 domain predictions
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