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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038375
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 4 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.689s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0530300.1
n.a. NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); TAIR: AT3G28700.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); Swiss-Prot: sp|Q54S83|NDUF7_DICDI Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial; TrEMBL-Plants: tr|A0A151RBA0|A0A151RBA0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0530300 LjG1.1_chr3 94730272 94734900 -
2 domain predictions
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LotjaGi3g1v0530300.2
n.a. NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); TAIR: AT3G28700.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); Swiss-Prot: sp|Q54S83|NDUF7_DICDI Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial; TrEMBL-Plants: tr|I1LIR1|I1LIR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0530300 LjG1.1_chr3 94730694 94734369 -
2 domain predictions
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LotjaGi6g1v0267000.1
n.a. S-adenosyl-L-methionine-dependent methyltransferase, putative; TAIR: AT1G04900.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); Swiss-Prot: sp|O14138|NDUF7_SCHPO Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial; TrEMBL-Plants: tr|K7MB59|K7MB59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0267000 LjG1.1_chr6 58072907 58083068 +
2 domain predictions
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LotjaGi6g1v0267000.2
n.a. S-adenosyl-L-methionine-dependent methyltransferase, putative; TAIR: AT1G04900.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); Swiss-Prot: sp|O14138|NDUF7_SCHPO Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial; TrEMBL-Plants: tr|K7MB59|K7MB59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0267000 LjG1.1_chr6 58072963 58081852 +
2 domain predictions
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