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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0530300 |
| Transcript ID | LotjaGi3g1v0530300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); TAIR: AT3G28700.1 NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185); Swiss-Prot: sp|Q54S83|NDUF7_DICDI Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial; TrEMBL-Plants: tr|I1LIR1|I1LIR1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0530300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:94730694..94734369) extracted from Lotus japonicus Gifu genome v1.2.
TTTTACTTCCCATTCAACTTCTCTTCCTTGTTCCTTCTCGCAGACCATTCTCACCACCCCACTTCCGATTCTGAGCTCGT CAAACACCTCAAAGGAATCATCAAGGTTCCCATTTCCCCCATTTCCATTACTTGGTTGGATTCAATTTTATATTCTATGT TTGAATTGAACTTGCTCAGCTATAACCAATTGTGACTAATCCAATTTTTACATGATAAAGTTTTGATTTTAATGGCACTA TCTAACTTGGGTCTTGCTGGTTTTTTAATTTATGTTTGTTGGTTATTGCTGAATTCTCAGTTCCGGGGAGGCCCTATTTC ACTAGGTGAGTACATGTCAGAAGTTTTGACAAATCCTAAAGCTGGATACTACATCAATAGAGATGTTTTTGGAGCAGAAG GTGATTTTATCACCTCTCCTGAAGTGAGCCAGATGTTTGGTGAGGTGAGGTTAATAGTGCACTTATCTTTGATTAACCTT ATGATGTCTTTTGTGGAATCAGGACCCTCTTGTGAAAATTTCATGACATTGTCATATTTAAATTTTGTGTATATGTCTCT TTTCATGTGTATTAAATATGTGGTACCCTCTGGGGAGAGATAGTCACGATGTTTTATTTGACATTGTCATGTGATATGAG AGGGTACGAATCAGTATTTTCGGGCATTAACTAGACTTGACTTTGATTGTGCTTCCAATTAATGACAAGAAGATTCTAAT GTCTTGTTCATGTAAATGTAGATGGTTGGTGTCTGGGTGATGTGTCTATGGGAGCAAATGGGCCAACCCCAAAGAGTAAA TCTAGTTGAGCTAGGCCCGGGGCGAGGAACTCTAATGGCTGATCTTCTTCGTGTAAGAAACCACAATTTTGACATGCTTT TATCCTGCAATTTTTATTATAAATGTTTGGCACTTTTGTTTACTTGTCAATTAAACGTTAAAAAGGCAACATCCCTTCAT TATGATTAAAGTTCTTAACTTCTTATAGGGTGCTTCAAAATTTAAGAACTTTGTTGAGTCATTGCATGTGCACCTGGTGG AGTGTAGTCCAGCACTGCAGAAGCTTCAGCACCAGAAGTTGAAATGCATTGATGACGAGAATGCAGCTCAAGATGCTGAT AAAAGAACTGTAAGCTCTTTGGTTGGCACTCCTGTATCATGGCATGCTACACTGGAGCAGGTTCCTTCAGGATGTATGTA TTGCCTTTCCAATCAAAATAGGCTTTTGGACACGAAATACCAAGTTTAACTTGTTATATGAAAAATCTAAGTTTATCTTA AGTTATGTGTTAACATAAATATCTTTTAGTACTGTATTGAATTATGCCCTGAACAAGTTATTCCTTTTGTTGTTCTCCAG CACCGACAATTATCATTGCACATGAGTTCTTTGATGCCCTACCAGTCCATCAATTTCAGGTGATAGAATGCTTGAGCTAT TAAACTGAAATAAAACTAAGGACATGATTAAGCTGCAAAATTATGTTATGAAATTTGAAATTCTGCAAGAATATTGCTTT CAATTTGTCTTGCATAGTGTCTTGGCTATTTTCTCTCTAGCATTCTTTCATCCTCTGTTCTGTTTTTGTCCTTTTTTTTT TTTGCTGGTAACTGATACATAGTTCTACCCGTTGTTTTCATTTGAGTTAGTCCATCTATTAAGTTGTGCCAAACCTGTGC ATTGCTATGGCCTGTCTTAACTATGTCTTTGCTATCTCACTGTTTGATCATCAAGGGACTGAATAATATTTAAGATGTTC AAGTTTTGTGCATGAACTGTTGCTTCTCATATTTAAATGATTCAAATTTCTTACATTTTTTGGCTTTGAAGAGCTTGGTC TTGGCAAACAATCTTTGTGTTCCTTAGAGTAAAAGTCTTTTCCTACTCATACTTTACACTGTTTTTATAAACAAAAAGAT ACCCAACTTGGCTGCAGCCACCTTTTATATATTTTCTATTAGCATCACATTTCCATGAAATATGATAGTGATTATTTATC TACAGAAAGCATCTCGTGGCTGGTGTGAAAAAATGGTTGATGTCGCTGAAGATTCATCATCGTAAGTATTGTAATGTAAT ATACTGAAACTGCATTTCTGCTGAATTTAGTGTATCTTACTTCTTACATACATTGGGTAGGTTTCATTTTGTTCTATCAC CACATCCTACACCTACAACACTATATTTATTGAAACGGTGCAAGTGGGCTGCAACTGAGGAGATTGCAAAACTCGATCAA ATTGAAGTTTGCCCCAAAGCTATGGAGTTGAGCCAGGACATTGCTGAAAGAATAAGCTCTGACGGTGGTGGAGCTCTAAT TATTGACTATGGTTCAGATGGAGTGATCTCCGATAGTCTCCAGGTCAAGCATTCCAGTCTTATTCCTTGTAGTATTACTA TCTAGTTTTTACTGTGTTTTATCTCCCAAGTTTGCATCCTTTATCCTAATTTTGTCTTGCATAGTACTTCCATGAAAATA TTAACATTAGCACAACATGTTGATTAAGTTTATGATAAAAATTGACAAACATCATGATACTAGTCAGAACCTGTACGTTT AAGTACATCTTTTCATCTAGATGAATGTATGTGCTTTGCGAAATCTAAGGGTTAGGTATAGAACCTGGAGAGAAACGTCC TTAGTATCTGTCTTTTTCTTCTGCTTGCTTTGCTTGTGAAATTGTAACCTATGCTGTCACTGGAATCTATTTGTGTGCCA TTGGGGAACCATTAGGTGTGTTGCTGTAAACAAGTTTCTTCTTGAAGATTAAATTACAACTTACGGATATTTTTTTACAA ACCTTTGCACAGCCCAATGTCTGAGTAAACCTTTCAATTCAATGTGAAGTTGATACATTATATTTAAATTGTCCCCCCTC CCATTGCTTTCTTTAACATGGTTTATGAATTTTTGCAGGCGATTCGGAAACACAAGTTTGTCAACCTTCTAGATGATCCT GGGTCTGCTGATATCAGTGCATATGTTGATTTCGCTTCCATCAAGCATTCCGCAGAGGAAGCTTCAGGTGCTTTTCTACC TAATAATAGGTGTAACATAGTATTTAAAATGAAAACATATTTGCTTAACAAATAAAGATTAGTTTTCAACTGATTTAGTC TGTGTTTGGGTAAACATCTAAATTAACCATTTATAGCGATAAGTGCTTCTATAATCTAATTTGATTAACTTTTTGAAATA AACTCAAAAATAGGTTATAGGTAGACATAAACGCTTATTCATAAGCTAATCTAAGCGGCTTATGAAAATAAGCTCAAAGT GGCTTATATGTTGGTCATAGACTCATAAGCTATTTACATGAACTCTCTCAATCACGTGCATAAGTGTTAACTGTGTAGCC TGTAAGATTAACTCAAATAAGCTTTTTGAAACGGTAATTTAATATTTATGCAGGAGAAGTATCTGTCCATGGGCCAATTA CTCAATCACAATTTCTTGGCTCCCTTGGAATAAACTTTCGCGTCGAATCTCTCCTTCAAAACTGCACTGAAGAACAGGCT GAATCTTTGAGGACAGGATATTGGCGTCTTGTCGGTGATGGTGAAGCTCCCTTTTGGGAAGGACCTGATGAAGGTGCCCC CATTGGTATGGGTACCCGGTATAAGGCAATGGCTATAGTAAACAAGAAGCAAGGTGTTCCAGTTCCTTTTCAGTGA
CDS sequence (LotjaGi3g1v0530300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGAAGTTTTGACAAATCCTAAAGCTGGATACTACATCAATAGAGATGTTTTTGGAGCAGAAGGTGATTTTATCAC CTCTCCTGAAGTGAGCCAGATGTTTGGTGAGATGGTTGGTGTCTGGGTGATGTGTCTATGGGAGCAAATGGGCCAACCCC AAAGAGTAAATCTAGTTGAGCTAGGCCCGGGGCGAGGAACTCTAATGGCTGATCTTCTTCGTGGTGCTTCAAAATTTAAG AACTTTGTTGAGTCATTGCATGTGCACCTGGTGGAGTGTAGTCCAGCACTGCAGAAGCTTCAGCACCAGAAGTTGAAATG CATTGATGACGAGAATGCAGCTCAAGATGCTGATAAAAGAACTGTAAGCTCTTTGGTTGGCACTCCTGTATCATGGCATG CTACACTGGAGCAGGTTCCTTCAGGATCACCGACAATTATCATTGCACATGAGTTCTTTGATGCCCTACCAGTCCATCAA TTTCAGAAAGCATCTCGTGGCTGGTGTGAAAAAATGGTTGATGTCGCTGAAGATTCATCATCGTTTCATTTTGTTCTATC ACCACATCCTACACCTACAACACTATATTTATTGAAACGGTGCAAGTGGGCTGCAACTGAGGAGATTGCAAAACTCGATC AAATTGAAGTTTGCCCCAAAGCTATGGAGTTGAGCCAGGACATTGCTGAAAGAATAAGCTCTGACGGTGGTGGAGCTCTA ATTATTGACTATGGTTCAGATGGAGTGATCTCCGATAGTCTCCAGGCGATTCGGAAACACAAGTTTGTCAACCTTCTAGA TGATCCTGGGTCTGCTGATATCAGTGCATATGTTGATTTCGCTTCCATCAAGCATTCCGCAGAGGAAGCTTCAGGAGAAG TATCTGTCCATGGGCCAATTACTCAATCACAATTTCTTGGCTCCCTTGGAATAAACTTTCGCGTCGAATCTCTCCTTCAA AACTGCACTGAAGAACAGGCTGAATCTTTGAGGACAGGATATTGGCGTCTTGTCGGTGATGGTGAAGCTCCCTTTTGGGA AGGACCTGATGAAGGTGCCCCCATTGGTATGGGTACCCGGTATAAGGCAATGGCTATAGTAAACAAGAAGCAAGGTGTTC CAGTTCCTTTTCAGTGA
Protein sequence (LotjaGi3g1v0530300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEVLTNPKAGYYINRDVFGAEGDFITSPEVSQMFGEMVGVWVMCLWEQMGQPQRVNLVELGPGRGTLMADLLRGASKFK NFVESLHVHLVECSPALQKLQHQKLKCIDDENAAQDADKRTVSSLVGTPVSWHATLEQVPSGSPTIIIAHEFFDALPVHQ FQKASRGWCEKMVDVAEDSSSFHFVLSPHPTPTTLYLLKRCKWAATEEIAKLDQIEVCPKAMELSQDIAERISSDGGGAL IIDYGSDGVISDSLQAIRKHKFVNLLDDPGSADISAYVDFASIKHSAEEASGEVSVHGPITQSQFLGSLGINFRVESLLQ NCTEEQAESLRTGYWRLVGDGEAPFWEGPDEGAPIGMGTRYKAMAIVNKKQGVPVPFQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 377 | 377 | 2.5E-166 | – | |
| PANTHER | 1 | 377 | 377 | 2.5E-166 | ||
| SUPERFAMILY | 1 | 377 | 377 | 1.33E-93 | ||
| Gene3D | 1 | 378 | 378 | 1.0E-99 | ||
| Pfam | 38 | 300 | 263 | 1.5E-76 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0530300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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