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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR038836
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.214s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0054500.1
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|V7CM89|V7CM89_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6571115 6596154 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.2
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|V7CM89|V7CM89_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6571569 6593716 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.3
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M0C3|I1M0C3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6572011 6592042 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.4
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M0C3|I1M0C3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6572011 6592847 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.5
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M0C3|I1M0C3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6572011 6593716 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.6
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M0C3|I1M0C3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6572011 6593716 +
2 domain predictions
2 GO terms
LotjaGi4g1v0054500.7
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.2 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M0C3|I1M0C3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0054500 LjG1.1_chr4 6572011 6595205 +
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.1
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64860227 64876005 -
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.2
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64864317 64870858 -
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.3
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64864317 64875053 -
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.4
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64864317 64875053 -
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.5
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64864317 64875503 -
2 domain predictions
2 GO terms
LotjaGi6g1v0333900.6
n.a. Mediator of RNA polymerase II transcription subunit 16; TAIR: AT4G04920.3 sensitive to freezing 6; Swiss-Prot: sp|F4JGZ1|MED16_ARATH Mediator of RNA polymerase II transcription subunit 16; TrEMBL-Plants: tr|I1M273|I1M273_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0333900 LjG1.1_chr6 64864317 64875535 -
2 domain predictions
2 GO terms