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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR039800
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.681s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0280800.1
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|K7M068|K7M068_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0280800 LjG1.1_chr4 65178332 65181456 -
2 domain predictions
2 GO terms
LotjaGi4g1v0280800.2
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|K7M068|K7M068_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0280800 LjG1.1_chr4 65178349 65181490 -
2 domain predictions
2 GO terms
LotjaGi5g1v0058000.1
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|A0A072VEI6|A0A072VEI6_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi5g1v0058000 LjG1.1_chr5 9768044 9777298 +
2 domain predictions
2 GO terms
LotjaGi5g1v0058000.2
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|A0A072VEI6|A0A072VEI6_MEDTR Calcium-binding EF hand protein; Found in the gene: LotjaGi5g1v0058000 LjG1.1_chr5 9772178 9777147 +
2 domain predictions
2 GO terms
LotjaGi5g1v0299600_LC.1
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|I3S126|I3S126_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0299600_LC LjG1.1_chr5 61629554 61638341 +
2 domain predictions
2 GO terms
LotjaGi5g1v0299600_LC.2
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|I3S126|I3S126_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0299600_LC LjG1.1_chr5 61629604 61637765 +
2 domain predictions
2 GO terms
LotjaGi5g1v0299600_LC.3
n.a. Calcium uptake protein 1; TAIR: AT4G32060.1 calcium-binding EF hand family protein; Swiss-Prot: sp|Q9SZ45|MICU_ARATH Calcium uptake protein, mitochondrial; TrEMBL-Plants: tr|I3S126|I3S126_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0299600_LC LjG1.1_chr5 61629607 61637726 +
2 domain predictions
2 GO terms