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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040141
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.580s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0250100_LC.1
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|O13724|ZPR1_SCHPO Zinc finger protein zpr1; TrEMBL-Plants: tr|A0A0R0JCK6|A0A0R0JCK6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250100_LC LjG1.1_chr1 60107389 60115526 -
2 domain predictions
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LotjaGi1g1v0250100_LC.2
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|O13724|ZPR1_SCHPO Zinc finger protein zpr1; TrEMBL-Plants: tr|B9H3J7|B9H3J7_POPTR Zinc finger family protein; Found in the gene: LotjaGi1g1v0250100_LC LjG1.1_chr1 60107431 60113698 -
2 domain predictions
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LotjaGi1g1v0250100_LC.3
n.a. Zinc finger protein ZPR1; TAIR: AT5G22480.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|P53303|ZPR1_YEAST Zinc finger protein ZPR1; TrEMBL-Plants: tr|A0A1J7FZ76|A0A1J7FZ76_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250100_LC LjG1.1_chr1 60107431 60113843 -
2 domain predictions
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LotjaGi1g1v0250100_LC.4
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|O13724|ZPR1_SCHPO Zinc finger protein zpr1; TrEMBL-Plants: tr|A0A0R0JCK6|A0A0R0JCK6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250100_LC LjG1.1_chr1 60107752 60114818 -
2 domain predictions
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LotjaGi1g1v0250400_LC.1
n.a. Zinc finger protein ZPR1; TAIR: AT5G22480.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q62384|ZPR1_MOUSE Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250400_LC LjG1.1_chr1 60153270 60163776 -
2 domain predictions
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LotjaGi1g1v0250400_LC.2
n.a. Zinc finger protein ZPR1; TAIR: AT5G22480.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q62384|ZPR1_MOUSE Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250400_LC LjG1.1_chr1 60153303 60163720 -
2 domain predictions
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LotjaGi1g1v0250400_LC.3
n.a. Zinc finger protein ZPR1; TAIR: AT5G22480.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q62384|ZPR1_MOUSE Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250400_LC LjG1.1_chr1 60153303 60163720 -
2 domain predictions
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LotjaGi1g1v0250400_LC.4
n.a. Zinc finger protein ZPR1; TAIR: AT5G22480.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q62384|ZPR1_MOUSE Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250400_LC LjG1.1_chr1 60160133 60163720 -
2 domain predictions
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LotjaGi1g1v0250600.1
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|P53303|ZPR1_YEAST Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250600 LjG1.1_chr1 60169109 60182255 -
2 domain predictions
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LotjaGi1g1v0250600.2
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q55E13|ZPR1_DICDI Zinc finger protein ZPR1 homolog; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250600 LjG1.1_chr1 60169941 60180071 -
2 domain predictions
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LotjaGi1g1v0250600.3
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q55E13|ZPR1_DICDI Zinc finger protein ZPR1 homolog; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0250600 LjG1.1_chr1 60169941 60180071 -
2 domain predictions
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LotjaGi1g1v0551700.1
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|P53303|ZPR1_YEAST Zinc finger protein ZPR1; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0551700 LjG1.1_chr1 108300819 108311890 +
2 domain predictions
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LotjaGi1g1v0551700.2
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q55E13|ZPR1_DICDI Zinc finger protein ZPR1 homolog; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0551700 LjG1.1_chr1 108300969 108312200 +
2 domain predictions
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LotjaGi1g1v0551700.3
n.a. Zinc finger protein ZPR1; TAIR: AT5G37340.1 ZPR1 zinc-finger domain protein; Swiss-Prot: sp|Q55E13|ZPR1_DICDI Zinc finger protein ZPR1 homolog; TrEMBL-Plants: tr|I1KM99|I1KM99_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0551700 LjG1.1_chr1 108301797 108311581 +
2 domain predictions
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