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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040780
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.109s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0397800.1
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88432059 88435947 +
2 domain predictions
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LotjaGi1g1v0397800.2
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434121 88435613 +
2 domain predictions
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LotjaGi1g1v0397800.3
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434122 88435613 +
2 domain predictions
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LotjaGi1g1v0397800.4
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434145 88435613 +
2 domain predictions
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LotjaGi1g1v0397800.5
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434181 88435613 +
2 domain predictions
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LotjaGi1g1v0397800.6
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0397800 LjG1.1_chr1 88434345 88435613 +
2 domain predictions
 –
LotjaGi1g1v0485700.1
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99888869 99892109 -
2 domain predictions
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LotjaGi1g1v0485700.2
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99889637 99890960 -
2 domain predictions
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LotjaGi1g1v0485700.3
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99889637 99891111 -
2 domain predictions
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LotjaGi1g1v0485700.4
n.a. 26S proteasome non-ATPase regulatory subunit-like protein; TAIR: AT1G29150.1 non-ATPase subunit 9; Swiss-Prot: sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 homolog; TrEMBL-Plants: tr|I3S4X3|I3S4X3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0485700 LjG1.1_chr1 99889637 99891131 -
2 domain predictions
 –