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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR041048
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.026s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0016800.1
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800 LjG1.1_chr1 2137856 2143052 +
2 domain predictions
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LotjaGi1g1v0016800.2
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800 LjG1.1_chr1 2138063 2141632 +
2 domain predictions
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LotjaGi1g1v0016800.4
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0016800 LjG1.1_chr1 2138503 2141632 +
2 domain predictions
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LotjaGi1g1v0425600.1
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003098 92008521 +
2 domain predictions
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LotjaGi1g1v0425600.2
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003213 92007530 +
2 domain predictions
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LotjaGi1g1v0425600.3
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003335 92007530 +
2 domain predictions
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LotjaGi1g1v0425600.4
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi1g1v0425600 LjG1.1_chr1 92003648 92007530 +
2 domain predictions
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LotjaGi4g1v0370900_LC.1
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi4g1v0370900_LC LjG1.1_chr4 75047950 75051702 -
2 domain predictions
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LotjaGi4g1v0370900_LC.2
n.a. RuvB-like helicase; TAIR: AT5G22330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9FMR9|RIN1_ARATH RuvB-like protein 1; TrEMBL-Plants: tr|K7KZ42|K7KZ42_SOYBN RuvB-like helicase; Found in the gene: LotjaGi4g1v0370900_LC LjG1.1_chr4 75047950 75051817 -
2 domain predictions
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LotjaGi6g1v0135200.1
n.a. RuvB-like helicase; TAIR: AT5G67630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9DE27|RUVB2_XENLA RuvB-like 2; TrEMBL-Plants: tr|G7J268|G7J268_MEDTR RuvB-like helicase; Found in the gene: LotjaGi6g1v0135200 LjG1.1_chr6 38991337 38994122 +
2 domain predictions
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