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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR041243
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.696s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi2g1v0426200.1
n.a. Tetratricopeptide repeat protein 1-like; TAIR: AT1G62740.1 stress-inducible protein; Swiss-Prot: sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1; TrEMBL-Plants: tr|I1LGM2|I1LGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426200 LjG1.1_chr2 92387436 92395275 +
2 domain predictions
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LotjaGi2g1v0426200.2
n.a. Tetratricopeptide repeat protein 1-like; TAIR: AT1G62740.1 stress-inducible protein; Swiss-Prot: sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1; TrEMBL-Plants: tr|I1LGM2|I1LGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426200 LjG1.1_chr2 92387673 92391043 +
2 domain predictions
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LotjaGi3g1v0330200.1
n.a. Ankyrin repeat domain protein, putative; TAIR: AT2G17390.1 ankyrin repeat-containing 2B; Swiss-Prot: sp|Q29Q26|AKR2B_ARATH Ankyrin repeat domain-containing protein 2B; TrEMBL-Plants: tr|V7BRV0|V7BRV0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0330200 LjG1.1_chr3 69779525 69786240 +
2 domain predictions
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LotjaGi3g1v0330200.2
n.a. Ankyrin repeat domain protein, putative; TAIR: AT4G35450.1 ankyrin repeat-containing protein 2; Swiss-Prot: sp|Q9SAR5|AKR2A_ARATH Ankyrin repeat domain-containing protein 2A; TrEMBL-Plants: tr|V7BRV0|V7BRV0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0330200 LjG1.1_chr3 69781171 69785353 +
2 domain predictions
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LotjaGi4g1v0216800_LC.1
n.a. tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr|V9VGV1|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC LjG1.1_chr4 51017894 51024757 -
2 domain predictions
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LotjaGi4g1v0216800_LC.2
n.a. tetratricopeptide repeat (TPR)-containing protein; TAIR: AT4G22670.1 HSP70-interacting protein 1; Swiss-Prot: sp|Q93YR3|F10AL_ARATH FAM10 family protein At4g22670; TrEMBL-Plants: tr|V9VGV1|V9VGV1_LOTJA HSP70 interaction protein; Found in the gene: LotjaGi4g1v0216800_LC LjG1.1_chr4 51017894 51024757 -
2 domain predictions
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LotjaGi6g1v0047500.1
n.a. Protein TIC 40, chloroplastic; TAIR: AT5G16620.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q8GT66|TIC40_PEA Protein TIC 40, chloroplastic; TrEMBL-Plants: tr|K7MPZ2|K7MPZ2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0047500 LjG1.1_chr6 8708473 8716799 +
2 domain predictions
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