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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0426200 |
| Transcript ID | LotjaGi2g1v0426200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Tetratricopeptide repeat protein 1-like; TAIR: AT1G62740.1 stress-inducible protein; Swiss-Prot: sp|Q43468|HSOP1_SOYBN Hsp70-Hsp90 organizing protein 1; TrEMBL-Plants: tr|I1LGM2|I1LGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0426200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:92387673..92391043) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGACGAAGCCAAAGCCAAAGGCAACGCAGCATTCTCCTCCGGCGACTTCACCGCCGCCATCCGCCACTTCTCCGA TGCCATAGCCCTCGCCCCGGAAAATCACGTCCTGTACTCCAACCGATCCGCCTCCTACGCCTCCCTCAAAAACTACACCG AGGCGTTATCCGACGCCAAGAAGACCGTCGAACTCAAACCCGATTGGTCCAAGGGCTACAGCCGCCTCGGCGCCGCTCAT CTCGGCCTCTCCCAATTCGACGACGCCGTTTCCGCCTACTCCAAAGGCCTCGAAATCGACCCCAATAATGAACCCCTCAA ATCAGGTCTCGCCGATGCACAGGCGGCGGCTGCGGCGGCGGCTTCCAGGTCCTCCCGCTCGGCGAATCCCTTCGGTGACG CTTTCTCCGGCCCTGAGATGTGGGCTAAGCTCACCGCGGACGCTACCACCAGGGGTTACCTTCAACAACCTGATTTTGTG AAGATGATGCAGGATATTCAGAAGGACCCCAACAATCTCAACTTGTATTTGAAGGATCCGAGGGTCATGCAAGCGTTTGG GGTTTTGCTCAACGTGAAGCTTCGTGCCCCTGAGGATTCTGATTTGCCTGATTCCCCTCCGGCTTCGTCGTCGGAGAGGA AGAGAGCTGCTGAAGCTGAGCCTGTGAGTCAACCTGAGCCAGAACCTGAGGCTATGGAGGTGGCGGATGAGGAGAGTGAA GCGAAGCAGAGGAAGGTTGAGGCTCAGAAGGAGAAGGAGGCGGGTAATGCTGCGTACAAGAAGAAGCAATTTGATACTGC GATTCAGCATTACTCTAAGGCTTTGGAGCTGGATGATGAGGATATATCGTTTCTCACCAACCGTGCTGCTGTTTACTTGG AAATGGGGAAGGTATGATTTATGGCTTAAAATAGATAAAATTTGATGGTGATTATTCATTGCTATAATTCAAAATGTTTC AGGTTTGGTCTATTTGTTTGTGAATTGCATTGCATACAGTTATCATGAACCAAATTGGAAAGATTATAATGTATTAGGGG ACAAGTATCTTTGCTCTTTGTATGTGATGCTCCATTTTTAACTTGGTCCTTACACTTAGCAGCTATGTTATAAACATGTA GTGCATCTGGAAGAATTAAGTTAAAAGCAATTATATTTAGAGCTGAATTGGAATCATTTTTTGTTTAGGGACCAAGTTGA AAATGAGTGTATGTGTATCTGTGTAAGTGTGTATATGTCGGAATTAAAATACAGGTTAAATTGCACTATTGTTTTGTGGG AACTGAGAAGAATTTGTGAAGTGTGAATAAGGCTAGGTTTTTGTCTAGGTGTTAACTTGTTCATCAAGTGGGTCTAGTTG CCATCAAAGCTAAAAAATGTGGTATCTGATATACCTGAGTTAACCAAGCCTTCAATAACTTCCATAATTTCAAGCTCACT AGTAGTGAGCAGTCAATAGTCTTTTGAGATATTACTATTGCCATACCTTCAATTGCAAGATACTTAAGGGCTAAGGCTAT GTTTGGGGGTTTTAGAGGGAGGGATGGAGAAGGCTTTGATGGGAGGGGAAGGGAGGGTAAACCCTTCGGGGGAACTTCAC AAAACAACCAAAAGAGGGTCTTGCAGGGTTTTCAAAAATTCTTCAAACCCTTCCTTCCTTTTTAAAATCTCCTGAGCAAG GGGAGGAGTTCTCATAAGCCTCCCTCTTCCCTTCCCTCCCATCCAAAACTCGACTACAAAAACACACCCTACATGTACCC TGTAGTCCAATACCTCCAAGGTGTCAGTGAGAAATGGTATCCAAGATTGTTGCTACTATGTCTGGTATAATGGATTCAGA AGAAAAGTAGAATAAGGATTGGTGTCACCAAGGGTTTAAAATAAGACTAGGATGTTGTATAAACAAAGTTTGAGGGAATC TATGTTTCAGCTAAGTGAAGGGACTCTCATCTTCCTGCACTTTGCATTCTTACAACTTTTCCTGGATGGACATTTTTTCA GTATGAGGATTGCATTAAAGATTGTGACAAGGCTGTTGAAAGAGGAAGAGAACTTAGAGCAGACTACAAGATGGTAGCAA GAGCTTTGACAAGGAAAGGGACTGCCTTGGTCAAAATGGCAAAATGCTCGGCAGATTTTGATCCTGCTATTGAGACCTTC CAAAAAGCTCTGACAGAGCACCGCAACCCAGATACCTTGAAGAAACTTAATGAGGCTCAGAAGGCTAAGAAAGATCTAGA ACAAAAAGAATACTTTGATCCAAAGTTGGCTGATGAGGAGAGAGAAAAAGGTATTGTCTTCTTCAGTGTAATCTCCCCAG GCTCTTTATTTCCTGCAAGCATCACTTTTATTTTTGAAGTACTCCATTTACTGTGTATCCTTTCAATTTTGTTTTTATTC ATATAAATTGACTACACTTTACTGAAAATGTTGATGTGCAGGGAATGAGTTCTTTAAGCAGCAGAAGTATCCTGAAGCTG TGGGGCATTACACAGAGTCTATAAGAAGAAATCCGAACGACCCTAGGGTAATAATATTCCTTTTGCAGAGGTGCTAGTCC ATGTGTTATTGCAGTCCTAATCCGTTTGAATATTTCATTTGTTTCAGGCTTATAGTAACAGGGCTGCATGTTACACTAAA CTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGCATTGAGCTCGATCCAACCTTCGTCAAGGGTTATACCAG GAAAGGAGCGGTTCAATATTTCATGAAAGATCATGAAAAGGCTTTGGAAACATATAGGGAGGGGTTGAAACTAGACCCGA ACAACCAGGAGTTGCTTGATGGCATTGGAAAGTATGAGACTGGTCCCGAAATTTGTCTTTAACATTTCTAGTTTCCACGT TGACTTTCATAAATAATGTCTGTAATCATCTAATATCCATTTCAGATGTATGCAACAAATCAATAAGGCTAGCCGTGGAG ATTTAACTCCTGAAGAATTGAAGGAGAGACAGGTGTCATACTGCTTTACCCTGACTGCAAAAATCATTGAAATTTGAAAA AATATTTTATTTATATATATATTCTATGTATTACTTACATCTATTTTTAAATCTTGTATTCTTGCAGGCCAAGGGAATGC AGGACCCAGAGATACAGAATATCCTGCAAGACCCTGTTATGAGACAGGTTTGCTCTCTATTTGGTTGCATTTTGGTGTTA CTTGTGTCTTGTATTGTAAGAATTTGATGTGCTTATAAGTGTTGGGTGTATATGCAGGTATTGGTTGATTTCCAGGAAAA TCCTAAGGCTGCGCAGGATCATGCAAAGAATCCAATGGTGATGAGCAAGATCCAAAAACTGATCAGTGCTGGAATTGTGC AGATGAAATAA
CDS sequence (LotjaGi2g1v0426200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGACGAAGCCAAAGCCAAAGGCAACGCAGCATTCTCCTCCGGCGACTTCACCGCCGCCATCCGCCACTTCTCCGA TGCCATAGCCCTCGCCCCGGAAAATCACGTCCTGTACTCCAACCGATCCGCCTCCTACGCCTCCCTCAAAAACTACACCG AGGCGTTATCCGACGCCAAGAAGACCGTCGAACTCAAACCCGATTGGTCCAAGGGCTACAGCCGCCTCGGCGCCGCTCAT CTCGGCCTCTCCCAATTCGACGACGCCGTTTCCGCCTACTCCAAAGGCCTCGAAATCGACCCCAATAATGAACCCCTCAA ATCAGGTCTCGCCGATGCACAGGCGGCGGCTGCGGCGGCGGCTTCCAGGTCCTCCCGCTCGGCGAATCCCTTCGGTGACG CTTTCTCCGGCCCTGAGATGTGGGCTAAGCTCACCGCGGACGCTACCACCAGGGGTTACCTTCAACAACCTGATTTTGTG AAGATGATGCAGGATATTCAGAAGGACCCCAACAATCTCAACTTGTATTTGAAGGATCCGAGGGTCATGCAAGCGTTTGG GGTTTTGCTCAACGTGAAGCTTCGTGCCCCTGAGGATTCTGATTTGCCTGATTCCCCTCCGGCTTCGTCGTCGGAGAGGA AGAGAGCTGCTGAAGCTGAGCCTGTGAGTCAACCTGAGCCAGAACCTGAGGCTATGGAGGTGGCGGATGAGGAGAGTGAA GCGAAGCAGAGGAAGGTTGAGGCTCAGAAGGAGAAGGAGGCGGGTAATGCTGCGTACAAGAAGAAGCAATTTGATACTGC GATTCAGCATTACTCTAAGGCTTTGGAGCTGGATGATGAGGATATATCGTTTCTCACCAACCGTGCTGCTGTTTACTTGG AAATGGGGAAGTATGAGGATTGCATTAAAGATTGTGACAAGGCTGTTGAAAGAGGAAGAGAACTTAGAGCAGACTACAAG ATGGTAGCAAGAGCTTTGACAAGGAAAGGGACTGCCTTGGTCAAAATGGCAAAATGCTCGGCAGATTTTGATCCTGCTAT TGAGACCTTCCAAAAAGCTCTGACAGAGCACCGCAACCCAGATACCTTGAAGAAACTTAATGAGGCTCAGAAGGCTAAGA AAGATCTAGAACAAAAAGAATACTTTGATCCAAAGTTGGCTGATGAGGAGAGAGAAAAAGGGAATGAGTTCTTTAAGCAG CAGAAGTATCCTGAAGCTGTGGGGCATTACACAGAGTCTATAAGAAGAAATCCGAACGACCCTAGGGCTTATAGTAACAG GGCTGCATGTTACACTAAACTGGGGGCAATGCCTGAAGGTTTAAAGGATGCAGAGAAGTGCATTGAGCTCGATCCAACCT TCGTCAAGGGTTATACCAGGAAAGGAGCGGTTCAATATTTCATGAAAGATCATGAAAAGGCTTTGGAAACATATAGGGAG GGGTTGAAACTAGACCCGAACAACCAGGAGTTGCTTGATGGCATTGGAAAATGTATGCAACAAATCAATAAGGCTAGCCG TGGAGATTTAACTCCTGAAGAATTGAAGGAGAGACAGGTGTCATACTGCCAAGGGAATGCAGGACCCAGAGATACAGAAT ATCCTGCAAGACCCTGTTATGAGACAGGTATTGGTTGA
Protein sequence (LotjaGi2g1v0426200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADEAKAKGNAAFSSGDFTAAIRHFSDAIALAPENHVLYSNRSASYASLKNYTEALSDAKKTVELKPDWSKGYSRLGAAH LGLSQFDDAVSAYSKGLEIDPNNEPLKSGLADAQAAAAAAASRSSRSANPFGDAFSGPEMWAKLTADATTRGYLQQPDFV KMMQDIQKDPNNLNLYLKDPRVMQAFGVLLNVKLRAPEDSDLPDSPPASSSERKRAAEAEPVSQPEPEPEAMEVADEESE AKQRKVEAQKEKEAGNAAYKKKQFDTAIQHYSKALELDDEDISFLTNRAAVYLEMGKYEDCIKDCDKAVERGRELRADYK MVARALTRKGTALVKMAKCSADFDPAIETFQKALTEHRNPDTLKKLNEAQKAKKDLEQKEYFDPKLADEEREKGNEFFKQ QKYPEAVGHYTESIRRNPNDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFVKGYTRKGAVQYFMKDHEKALETYRE GLKLDPNNQELLDGIGKCMQQINKASRGDLTPEELKERQVSYCQGNAGPRDTEYPARPCYETGIG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 521 | 521 | 3.0E-276 | – | |
| Gene3D | 1 | 116 | 116 | 1.2E-38 | ||
| PANTHER | 1 | 521 | 521 | 3.0E-276 | – | |
| ProSiteProfiles | 2 | 103 | 102 | 25.632 | ||
| ProSiteProfiles | 2 | 35 | 34 | 9.47 | ||
| SUPERFAMILY | 2 | 114 | 113 | 1.48E-40 | ||
| SMART | 2 | 35 | 34 | 0.047 | ||
| Pfam | 7 | 59 | 53 | 1.5E-4 | – | |
| ProSiteProfiles | 36 | 69 | 34 | 8.024 | ||
| SMART | 36 | 69 | 34 | 1.4 | ||
| SMART | 70 | 103 | 34 | 2.1E-6 | ||
| ProSiteProfiles | 70 | 103 | 34 | 12.361 | ||
| Pfam | 71 | 103 | 33 | 3.4E-7 | ||
| Gene3D | 127 | 195 | 69 | 7.6E-22 | – | |
| Pfam | 137 | 191 | 55 | 4.4E-20 | ||
| SMART | 147 | 186 | 40 | 5.8E-7 | ||
| MobiDBLite | 197 | 257 | 61 | - | – | |
| Coils | 231 | 252 | 22 | - | – | |
| MobiDBLite | 236 | 257 | 22 | - | – | |
| Gene3D | 245 | 377 | 133 | 3.7E-43 | ||
| SUPERFAMILY | 247 | 374 | 128 | 7.21E-42 | ||
| ProSiteProfiles | 248 | 281 | 34 | 9.824 | ||
| ProSiteProfiles | 248 | 488 | 241 | 31.122 | ||
| SMART | 248 | 281 | 34 | 0.0013 | ||
| Pfam | 255 | 296 | 42 | 5.0E-9 | – | |
| ProSiteProfiles | 282 | 315 | 34 | 6.254 | ||
| SMART | 282 | 315 | 34 | 7.8E-4 | ||
| SMART | 323 | 360 | 38 | 39.0 | ||
| ProSiteProfiles | 327 | 360 | 34 | 5.015 | ||
| Coils | 359 | 379 | 21 | - | – | |
| Gene3D | 378 | 503 | 126 | 2.3E-42 | ||
| SUPERFAMILY | 386 | 499 | 114 | 1.61E-42 | ||
| ProSiteProfiles | 387 | 420 | 34 | 9.027 | ||
| SMART | 387 | 420 | 34 | 0.012 | ||
| Pfam | 394 | 435 | 42 | 2.4E-8 | – | |
| SMART | 421 | 454 | 34 | 1.2E-4 | ||
| ProSiteProfiles | 421 | 454 | 34 | 8.437 | ||
| SMART | 455 | 488 | 34 | 5.4E-6 | ||
| ProSiteProfiles | 455 | 488 | 34 | 11.505 | ||
| Pfam | 456 | 488 | 33 | 2.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0426200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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