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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0330200 |
| Transcript ID | LotjaGi3g1v0330200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat domain protein, putative; TAIR: AT4G35450.1 ankyrin repeat-containing protein 2; Swiss-Prot: sp|Q9SAR5|AKR2A_ARATH Ankyrin repeat domain-containing protein 2A; TrEMBL-Plants: tr|V7BRV0|V7BRV0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0330200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:69781171..69785353) extracted from Lotus japonicus Gifu genome v1.2.
CCATTTGTTGTTATTGCCAATTTGGAAAAGGATTGTGCCAGATGGTGTCATCTCTTATAGTTACTTATAGCTGCTATCTG CTTCATATTAATCTTTAAGGCTTGCATAGAAGTGAGATTTATTTAATAATTAAATAAGGAGAGACATTTGATGGCTTTGG AACTCTGACCTGAGTATTCTCTTTTTCATTTTTCACTCAGAAGTGAATGTCATTTGTCATTGGATGGACTCTGAATTTCC AATCTATACTGATATTTCTTCATATAGACTTGCTAATACTTAAAATGTTCAATGCACAGGATCCAAGTATCAAGGAATTG GCTGAACAAATAGCAAAAGATCCATCGTTCAATCAGATGGCAGAGCAGCTTCAGAAATCATTTCAAGGACCAACACCGGA GAGTGTGCCGAACTTTGATAATCAGCAATATTTTTCAACCATGCAACAGGTCATGCAGAATCCTAATTTTATGACCATGG CTGAGCGCCTGGGTAATGCATTGATGCAGGTATTTATGAAAGTTCTTCCTTATGTTTTTGTTACACTAAATGTCTACTGG TTGGTAAAATGTATGCGCTGTGTATCACAGGATCCATCTATGTCTTCTATGCTTGAAAGTTTTACTAATCCATCAAATAA AGACCAACTTGAAGAGAGAATGGCACTCATCAAGGAAGATCCTTCTCTGAAACATATTTTAGATGAGATAGAGACTGGTG GGCCTGCTGCTATGATGAGGTTTGGATGCCAAACATGTTTTATTTTCTTTAACTGTTTTGGCATTTCCATATTCCCACAA TTATTTGTTTTTGTATAAATTTTAGAAGTTTCTGAGACCTCTGGTCCCACCTAGTTTCAGAAGTTCTAGATGTAGCGGGC ATAATCGGGAATTCCCTTCAATCACAGATCCCAGCCCTCGGCCCCTAAATGGGGAACCTCCTTTTGTGAAAAACCCAACC CCTAGGTCTTTATGGGAAACACCTTTTGTCCCGACCCTTACTGAACCATCTATAGGTTCCAAAGCTCGTCTTAATGGGAA ACACTTTTTGATCTCGACCAAAATGAATGTATCATCAGTTAACTATCATGGCATCATACTAATTCATTCATACAGTCATA TTGTATTATGATTTAGTGAAATCAGTCTTGATATACGTACAGCCACTTATCATTTATGATGCAACTTTGGCATTCACTTG TGTTTACTTATGCCCATTCTGAGTTTAAAGAATAATGGACCAATTGTGAAGAAAAAATTATTGTATTTCGTCTTGATATA CGTACAGCCATTTATCATTTATGATGCAACTTTGGCATTAACTTGTGTTTATTTATGCCCATTCTGAGTTTAAAGAATAA TAGACCAATTGTGAAGAAAAAATTATTGCATTTCATTGCATCGTCATACCTTCATAGCTTTTCTTTTCACATACTGCAGA TACTGGAACGATGAGGAGGTTCTGCGGAAGTTGGGACAAGCAATGGGCCTTGCTAATCCTGGAGAGGCTGCTGCTTCTGC TGAAAATTCTGGGCCAGATGAGGCAGAAGATGTGGGAAATGAAGATGAATCAATCGTTCATCAAACTGCTAGTGTTGGTG ATTTGGAGGTATGACGCAGCATTCTTTGTGCATATCCTTTCCCAGTATTTAATTCAGTTTTTGAATGGAAACTACTTCCA TCTTTGTTGGTTCACTTGGAATTCCTAAGCTCCCTATGAAGTCTTTTATTTGGAAAGTGGTGCTTGATATATTTAATACT AAGTAATGACTAATTGCACGTTTGCCATCCACGTTAGTCTCTTCCCCTTGATATTTGTCTTAGGTTTTATGCTTTATTTT CTTTTGCTAACTTTGAAGGAATGCAAATGTAAACTGAACTAATATTGTTTCTTCATTAAGTGTTGATAGGGCTGTTAAGC TTAATGTATCTAGTTTTCCTATTGTTAAAAAATTCGACAATTGTCTTCATTGTTTCTGGGTATGATTTGAAGATATGAGA GCTAACTTTTTACACCAATTAATTAGGGCCTGAAAAATGCACTAGCCGCTGGTTCTGACAAGGATGAAGAAGATTCAGAG GGAAGAACTGCTCTGCATTTTGCCTGTGGATATGGCGAGGTATGCTAATATCCAGAGTAAATATTTTCTTAACTTTTATA ACTTATGTTTCTTGTTTTTTTTTTCCCTAAGTTTCTACTTATGTTACTGGGTTGAGGGCTTTTTTAGAACCATGGTGGGA AGGAAATGGAGGATGCATCAAGGGACTCACTACTCAGGATGTTATTGTTTAGTAAAATTGCCTTGATTTTTCTTCCTCCA TGGTGAATCTAGAAAGTTTACATATGATAAGAACCGGCTAAGAATAGGAAAATGAACTGGATGAAAATAATATTATTAAG AACACTCCGATTCTCCATAATTGGAAGTAACTGAGAAGAAAAGTGTTTACAAGGTAAAACTCCCCTGGATTTTTCGATAG ATCCAGTCATGTCCTAAACTCCCAGCTGATTTCCTACCTTTTTCCTTTCCTTCTATTTTATAATCCCTGGTTAGTTATCC CCTGGCCCGACAGTTAGTATAACTGACAGTGACAGGTTGACAACTAAGCCCATTCAGTTATTGTCACAATTAACTAACGC TAACCTGCACTAACACACTGAGGTGCAGGATTATTTTCCCTGGTCATCTCTTAAATTTTCTTCTATAGACCATAGTGATA GGGGGTCGAATCCCACCAACATACCATAATGCATGATAGGGATAGTGAACATGTAATAGTTTGAGTTAATTTCTGAAATT TGGGGCTAGTCTGCGTGGGGTTTTGTGGCAAGCATTAGATACATCCAAATGACTTTGCTTTGTGATCTTGTTCATTAGTG GTTGTCTTCTTCCACCTTGGAGCATTTCTCCATGATATGTTTAGCAGTTTCAATTAGTGTCTAGTCTAACACTATGAAAG CTTTCTGTTTTTTCCATTCTCTTGTACGTGGTTAGGAATTATTTATCTATTGTACTTGTTTTTTTCAATTTAATGCTAGG GAGACAGCTATGGGACCGGAAAATGTGAGATATTTGGAATTTTTTTATCTTTCTGCCTTGCAGAATGCTTGCAATTTTAA AGCCATTTATTTCCTCTTGCACATTTTATGCGATGGCTTCCATTTAGTCTACTGGACATAGTTATTCCATAAGGAAACCT TTTTCTCAGAAATGGGGGAATTGACTGCCCTTGTGTTTTGTCAAATTCCTTTTTCTTCAACCCGGTTAAATTTATTACCT TTTTTTTGTTTAACTTGGTTTCTGAAATAAATTTAAAATTCTGTTAACATACTTTGGATGTATGGTCTAGGATTTTTAAA GCAAATATAAATGTTGCCATAAGTTTAGAATTAGATGTAAAAACAATTATATAGGTGGGGATTGTAGAGATAGCAGTGAC AATTGTGGGCCTGTGACAAGGCTGTTTTACATCGTAGTGATGGTAAAGGCAGAAGCATTGATAGAAATAGTGGGGTAATA TTGTTGCCAGTGATGTCTTAGTGGCTGTGGAGTGTGGAGAATATGGATACTGGCATATTGCTATCAGTATCATGTACTAG CTTCCTCCACCCGCTCTCCCCTTCAAGGGTCTGTAAGCAAAGCGAAAGTTCATGGGCATTGGAATTGTAGATTATATATA GTAGGCTCTTTGTAGTATATGGCTGAACAGATTCCTACTTTGTCCACTCCCTCTCCCTTTGATGGTGTGCAAGAAATGTA AAAAAAAAAAGCTTATCAGGAATTCAAATTTAGTATTCTAGCTAACTTTTTCTACTTTAGCTGAAAATGCGCTCCTGATA TTATTCCAGGTGAAGTGTGCGCAAGTTCTCCTTGAGGCCGGAGCAAAAGTTGATGCTTTGGATAAAAATAAGAACACAGC TCTTCATTATGCAGCTGGTTATGGGAGGAAGGAATGTGTGGCCCTGCTCCTTGAAAACGGTGCTGCAGTGTAAGTAGCCT TTTTAGTTTGTGATATGAAAATCTTCAACTATTCAATTATTGATAGTTTATTCTGGTTGATTCCCTCCTTGTTCAATTCG CAGTACACTCCAGAATATGGACGGGAAAACTCCTATAGATGTTGCGAAGCTAAACAATCAGAATGACGTTCTAAAGCTGC TTGAGAAAGATGCTTTCCTGTAA
CDS sequence (LotjaGi3g1v0330200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGCAGCTTCAGAAATCATTTCAAGGACCAACACCGGAGAGTGTGCCGAACTTTGATAATCAGCAATATTTTTC AACCATGCAACAGGTCATGCAGAATCCTAATTTTATGACCATGGCTGAGCGCCTGGGTAATGCATTGATGCAGGATCCAT CTATGTCTTCTATGCTTGAAAGTTTTACTAATCCATCAAATAAAGACCAACTTGAAGAGAGAATGGCACTCATCAAGGAA GATCCTTCTCTGAAACATATTTTAGATGAGATAGAGACTGGTGGGCCTGCTGCTATGATGAGATACTGGAACGATGAGGA GGTTCTGCGGAAGTTGGGACAAGCAATGGGCCTTGCTAATCCTGGAGAGGCTGCTGCTTCTGCTGAAAATTCTGGGCCAG ATGAGGCAGAAGATGTGGGAAATGAAGATGAATCAATCGTTCATCAAACTGCTAGTGTTGGTGATTTGGAGGGCCTGAAA AATGCACTAGCCGCTGGTTCTGACAAGGATGAAGAAGATTCAGAGGGAAGAACTGCTCTGCATTTTGCCTGTGGATATGG CGAGGTGAAGTGTGCGCAAGTTCTCCTTGAGGCCGGAGCAAAAGTTGATGCTTTGGATAAAAATAAGAACACAGCTCTTC ATTATGCAGCTGGTTATGGGAGGAAGGAATGTGTGGCCCTGCTCCTTGAAAACGGTGCTGCAGTTACACTCCAGAATATG GACGGGAAAACTCCTATAGATGTTGCGAAGCTAAACAATCAGAATGACGTTCTAAAGCTGCTTGAGAAAGATGCTTTCCT GTAA
Protein sequence (LotjaGi3g1v0330200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEQLQKSFQGPTPESVPNFDNQQYFSTMQQVMQNPNFMTMAERLGNALMQDPSMSSMLESFTNPSNKDQLEERMALIKE DPSLKHILDEIETGGPAAMMRYWNDEEVLRKLGQAMGLANPGEAAASAENSGPDEAEDVGNEDESIVHQTASVGDLEGLK NALAAGSDKDEEDSEGRTALHFACGYGEVKCAQVLLEAGAKVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNM DGKTPIDVAKLNNQNDVLKLLEKDAFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | - | – | |
| PANTHER | 11 | 267 | 257 | 9.0E-166 | – | |
| PANTHER | 11 | 267 | 257 | 9.0E-166 | – | |
| Pfam | 74 | 117 | 44 | 5.7E-8 | ||
| MobiDBLite | 121 | 142 | 22 | - | – | |
| SUPERFAMILY | 141 | 261 | 121 | 5.44E-33 | ||
| SMART | 142 | 171 | 30 | 750.0 | ||
| ProSiteProfiles | 142 | 261 | 120 | 34.827 | ||
| Gene3D | 145 | 267 | 123 | 1.5E-47 | ||
| Pfam | 148 | 239 | 92 | 4.4E-16 | ||
| ProSiteProfiles | 175 | 207 | 33 | 13.598 | ||
| SMART | 175 | 204 | 30 | 3.4E-4 | ||
| SMART | 208 | 237 | 30 | 9.0E-5 | ||
| ProSiteProfiles | 208 | 240 | 33 | 11.861 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0330200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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