Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • G3DSA:3.90.25.10
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 135 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 0.037s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0019009.1
n.a. PREDICTED: UDP-glucuronate 4-epimerase 5-like [Cicer arietinum] gi|502175956|ref|XP_004515772.1| chr0 7502435 7502657 +
1 domain prediction
 –
Lj0g3v0024229.1
n.a. PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356525600|ref|XP_003531412.1| chr0 9650262 9669501 +
1 domain prediction
 –
Lj0g3v0024229.2
n.a. PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356525600|ref|XP_003531412.1| chr0 9650262 9653325 +
1 domain prediction
 –
Lj0g3v0024229.3
n.a. PREDICTED: probable rhamnose biosynthetic enzyme 1-like [Glycine max] gi|356556634|ref|XP_003546628.1| chr0 9665971 9669501 +
1 domain prediction
 –
Lj0g3v0024519.1
n.a. pinoresinol-lariciresinol reductase homolog [Lotus japonicus] gi|116077988|dbj|BAF34845.1| chr0 9773259 9775297 +
1 domain prediction
 –
Lj0g3v0067389.1
n.a. pinoresinol-lariciresinol reductase homolog [Lotus japonicus] gi|116077990|dbj|BAF34846.1| chr0 23918993 23921836 +
1 domain prediction
 –
Lj0g3v0090789.1
n.a. PREDICTED: GDP-mannose 4,6 dehydratase 2 [Vitis vinifera] gi|225431177|ref|XP_002269841.1| chr0 37487501 37489477 +
1 domain prediction
 –
Lj0g3v0154629.1
n.a. n.a. chr0 72443163 72445768 -
1 domain prediction
 –
Lj0g3v0154629.2
n.a. n.a. chr0 72443163 72444874 -
1 domain prediction
 –
Lj0g3v0254979.1
n.a. PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max] gi|356529038|ref|XP_003533104.1| chr0 132393359 132396140 -
1 domain prediction
 –
Lj0g3v0254979.2
n.a. PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max] gi|356529038|ref|XP_003533104.1| chr0 132393359 132396140 -
1 domain prediction
 –
Lj0g3v0283729.1
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like isoform X1 [Cicer arietinum] gi|502117369|ref|XP_004495797.1| chr0 147094822 147099650 -
1 domain prediction
 –
Lj0g3v0283729.6
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like [Glycine max] gi|356576698|ref|XP_003556467.1| chr0 147094822 147097143 -
1 domain prediction
 –
Lj0g3v0315639.1
n.a. PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera] gi|359474329|ref|XP_003631433.1| chr0 164763643 164763877 +
1 domain prediction
 –
Lj1g3v2124770.1
n.a. pterocarpan reductase [Lotus japonicus] gi|116077986|dbj|BAF34844.1| chr1 25389907 25392093 +
1 domain prediction
 –
Lj1g3v4192290.1
n.a. UDP-sulfoquinovose synthase [Medicago truncatula] gi|357509541|ref|XP_003625059.1| chr1 49618594 49622316 +
1 domain prediction
 –
Lj1g3v4202330.1
n.a. UDP-sulfoquinovose synthase [Medicago truncatula] gi|357509541|ref|XP_003625059.1| chr1 49640721 49644443 -
1 domain prediction
 –
Lj1g3v4790750.1
n.a. PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-like [Cicer arietinum] gi|502113049|ref|XP_004494526.1| chr1 57722862 57727120 +
1 domain prediction
 –
Lj1g3v4979970.1
n.a. PREDICTED: GDP-mannose 3,5-epimerase-like isoform X1 [Cicer arietinum] gi|502117369|ref|XP_004495797.1| chr1 60593616 60597481 -
1 domain prediction
 –
Lj2g3v1172450.1
n.a. leucoanthocyanidin reductase LAR1-2 [Lotus corniculatus] gi|85542822|gb|ABC71327.1| chr2 18562948 18567597 +
1 domain prediction
 –
Lj2g3v1240070.1
n.a. UDP-glucuronate 4-epimerase [Medicago truncatula] gi|357469707|ref|XP_003605138.1| chr2 19622905 19624912 +
1 domain prediction
 –
Lj2g3v1536370.1
n.a. pinoresinol-lariciresinol reductase homolog [Lotus japonicus] gi|116077990|dbj|BAF34846.1| chr2 24217872 24221890 -
1 domain prediction
 –
Lj2g3v1705440.1
n.a. n.a. chr2 26322458 26324360 -
1 domain prediction
 –
Lj2g3v1734650.1
n.a. isoflavone reductase homolog [Lotus japonicus] gi|116077992|dbj|BAF34847.1| chr2 26770519 26779217 -
1 domain prediction
 –
Lj2g3v1734710.1
n.a. Isoflavone reductase-like protein [Medicago truncatula] gi|357483525|ref|XP_003612049.1| chr2 26794155 26803442 -
1 domain prediction
 –
Lj3g3v1128920.1
n.a. n.a. chr3 15166771 15166973 +
1 domain prediction
 –
Lj3g3v1128930.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Glycine max] gi|356545493|ref|XP_003541176.1| chr3 15166920 15167685 +
1 domain prediction
 –
Lj3g3v1131210.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Glycine max] gi|356543530|ref|XP_003540213.1| chr3 15234297 15237636 +
1 domain prediction
 –
Lj3g3v2737450.1
n.a. UDP-glucuronate 4-epimerase [Medicago truncatula] gi|357469707|ref|XP_003605138.1| chr3 33758594 33761798 -
1 domain prediction
 –
Lj3g3v2995680.1
n.a. PREDICTED: bifunctional polymyxin resistance protein ArnA-like [Cicer arietinum] gi|502145749|ref|XP_004506161.1| chr3 37190864 37193891 +
1 domain prediction
 –
Lj3g3v3187340.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max] gi|356550259|ref|XP_003543505.1| chr3 39227068 39231621 +
1 domain prediction
 –
Lj3g3v3188380.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 6-like isoform X1 [Cicer arietinum] gi|502081951|ref|XP_004487020.1| chr3 39244147 39248198 -
1 domain prediction
 –
Lj3g3v3360890.1
n.a. pterocarpan reductase [Lotus japonicus] gi|116077980|dbj|BAF34841.1| chr3 41246918 41250412 +
1 domain prediction
 –
Lj3g3v3360890.2
n.a. pterocarpan reductase [Lotus japonicus] gi|116077980|dbj|BAF34841.1| chr3 41246920 41250412 +
1 domain prediction
 –
Lj3g3v3360900.1
n.a. Isoflavone reductase-like protein [Medicago truncatula] gi|357473305|ref|XP_003606937.1| chr3 41247503 41253503 -
1 domain prediction
 –
Lj3g3v3360920.2
n.a. pterocarpan reductase [Lotus japonicus] gi|116077982|dbj|BAF34842.1| chr3 41255761 41258895 +
1 domain prediction
 –
Lj3g3v3360930.1
n.a. pterocarpan reductase [Lotus japonicus] gi|116077984|dbj|BAF34843.1| chr3 41259262 41262420 +
1 domain prediction
 –
Lj4g3v2020440.1
n.a. PREDICTED: UDP-glucuronate 4-epimerase 1-like [Glycine max] gi|356562525|ref|XP_003549520.1| chr4 28032533 28036645 +
1 domain prediction
 –
Lj4g3v2020450.1
n.a. n.a. chr4 28033589 28036645 -
1 domain prediction
 –
Lj4g3v2151390.1
n.a. GDP-L-fucose synthase [Medicago truncatula] gi|357511215|ref|XP_003625896.1| chr4 29772334 29774336 +
1 domain prediction
 –
Lj4g3v2312430.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cicer arietinum] gi|502150952|ref|XP_004508205.1| chr4 32174501 32177436 -
1 domain prediction
 –
Lj4g3v2704700.1
n.a. PREDICTED: UDP-arabinose 4-epimerase 1-like [Glycine max] gi|356525389|ref|XP_003531307.1| chr4 36430087 36435373 +
1 domain prediction
 –
Lj4g3v2916520.1
n.a. PREDICTED: UDP-glucose 4-epimerase-like [Cicer arietinum] gi|502139392|ref|XP_004503750.1| chr4 38800028 38802875 -
1 domain prediction
 –
Lj4g3v3004130.1
n.a. RecName: Full=UDP-glucose 4-epimerase GEPI48; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerasegi|3021357|emb|CAA06339.1| UDP-galactose 4-epimerase [Cyamopsis tetragonoloba] gi|11386775|sp|O65781.1|GALE2_CYATE chr4 39877179 39880625 +
1 domain prediction
 –
Lj5g3v0615080.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cicer arietinum] gi|502114561|ref|XP_004494986.1| chr5 7525556 7531773 -
1 domain prediction
 –
Lj5g3v0615080.2
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cicer arietinum] gi|502114561|ref|XP_004494986.1| chr5 7525556 7531190 -
1 domain prediction
 –
Lj5g3v0975910.1
n.a. MRNA-binding protein [Medicago truncatula] gi|357440743|ref|XP_003590649.1| chr5 15212525 15214801 +
1 domain prediction
 –
Lj5g3v1627920.1
n.a. PREDICTED: UDP-glucuronic acid decarboxylase 2-like [Cicer arietinum] gi|502117808|ref|XP_004495956.1| chr5 23549590 23553873 -
1 domain prediction
 –
Lj6g3v0367980.1
n.a. GDP-L-fucose synthase [Medicago truncatula] gi|357511215|ref|XP_003625896.1| chr6 3481317 3483406 -
1 domain prediction
 –
LotjaGi1g1v0420100.1
n.a. Isoflavone reductase like; TAIR: AT1G75280.1 NmrA-like negative transcriptional regulator family protein; Swiss-Prot: sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein; TrEMBL-Plants: tr|I3SR46|I3SR46_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0420100 LjG1.1_chr1 91362344 91364724 +
1 domain prediction
 –