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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002669
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.050s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0068049.1
n.a. PREDICTED: urease accessory protein ureD-like isoform 1 [Glycine max] gi|356575140|ref|XP_003555700.1| chr0 24287970 24289520 +
2 domain predictions
2 GO terms
Lj0g3v0068049.2
n.a. PREDICTED: urease accessory protein ureD-like isoform 2 [Glycine max] gi|356575142|ref|XP_003555701.1| chr0 24287970 24289520 +
2 domain predictions
2 GO terms
Lj0g3v0252619.1
n.a. urease accessory protein UreD [Glycine max] gi|351727327|ref|NP_001236645.1| chr0 131037346 131042437 -
2 domain predictions
2 GO terms
Lj4g3v0686440.1
n.a. PREDICTED: urease accessory protein ureD-like isoform 1 [Glycine max] gi|356575140|ref|XP_003555700.1| chr4 11537078 11544314 +
3 domain predictions
2 GO terms
LotjaGi6g1v0021100.1
n.a. Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021100 LjG1.1_chr6 3902200 3909779 -
4 domain predictions
2 GO terms
LotjaGi6g1v0021100.2
n.a. Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021100 LjG1.1_chr6 3902442 3909708 -
4 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.1
n.a. Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536166 17543741 +
3 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.2
n.a. Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536166 17543741 +
3 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.3
n.a. Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536166 17543741 +
3 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.4
n.a. Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536167 17543511 +
3 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.5
n.a. Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536167 17543511 +
3 domain predictions
2 GO terms
LotjaGi6g1v0086800_LC.6
n.a. Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC LjG1.1_chr6 17536232 17543584 +
3 domain predictions
2 GO terms