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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0021100 |
| Transcript ID | LotjaGi6g1v0021100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:3902200..3909779) extracted from Lotus japonicus Gifu genome v1.2.
ACAAGTGCATTTATTTAATATATTACTTCCTAGTTGATCTTCTTGTCTTCTCTATGTGGTGTGTTTGTACCATGTGCAAT TCGATCTGCTCCTCTCGACTTCTTTGACAACCAGGTTCATTGTCTTTCGTGTAATTTCACACTCTCTGGTGTTGTCGATC GTCCCCACTCCCCATTAATCTATTTGTTGTTACAATCAAATGACCTGTTAGTTTAAGTAGTGAGCTGTTTGATTTCTTGT AAATAGAAACAGTAGTTGATATAAGCTATCCAATTTTATCTTCATTCAACTAAGGTGAAAAATTGTTGTTTTGTGTGAAA TAATTTTTTGTTTTGTTTATAATTGTAAGAAAATCACTTTAGTTTCTGATCAATGAGGACTGTTTTTTAATCCAGCACCA GGAAGAATGAGAAATGGTGAGGAGGTCAAAGAAAAGGAAACAGGTTCAGTGGTAGTTGAAAAAGTGGGAGGCAGATCATC AGTGACAAGCTGCATATCAAGATATCCCTTGAAGTTCATCATACCCAAAAAGGTGTTGAACAATCATTTTTTCATTTTTT TTGATTTCCCAGTCTTGTTCTTATTTAAGTGTCTACTTGTGCTATGTAGTGATTATTGGCACAGAAGTCTTATCTTGACA TGCAATGCAAAGATCTTGATGTTTGTTTCACTGATTGCTTAGGTGGGTTCTTCCAAAACTGATGCTGTCTGGGTTTATGC CCTCAATTTTGGAGGTGGAATTGTATCTGTAAGTTTCTTTTTTCTTCCCCTTCCTTCAAACTGTCTTTGTGTTATGTTTC TATTTGCATATGAATTTGGACTTGTGCTTGCCTTATGAGGTGTAGGGTGATAATATATCATGCAAGTTTTCTGTGGGAGA TGGCTGTACCATGGTGTTAACGACCCAGGGCTCCACTAAGGTCGACTATTTTTTTTTCCATTCTCATTAAATTTTTTTCT CTCCTTGAAGTGATTTATCTTGATTTGTGCTGGCTTCTTGGTCAGGTGCTTATGAATATGATACATTATCTATCTGATTG GTTGTTTTGGTCAGAGGGACATCTGTTGATAATTTCGCTCTCTCTATTTAGGTCTATAAATCTGTTGGATCAAAGTGTTC TCACCAAATATTAGAGGTAACAAAACTTTATAATTCTCTTGGGGTTCTTCCATTTATGCTTGTCATTATTAACTTCAGAA GTTGTATGTTTTACATGATAGAAAAATGATTAGCGTTGATTAATTTTTAGTTTTTTACGTTACAATACCTAATGACAATC AAGATTTATGGCCAAGGTATGAGGATTATATAATTTTGGTCGGATTCTAGTAATTTGAAGTTCTGAATTTTTTACTGCAT GACATCTACTCTCAAGAGAATTTGCTTGATGACTTCCATTACTATGATTGACTATTTGGTCAGTCATTATAGAGTGCTTT GTAGCTGAAATTCATAGTGAGAAAAGGCATTGGTTGTTGCAGTGGTATAGCTTGAGTTTATTGGTTTTAAGTGAGAACTG ATAACTGATAACTGTCAAATTCATCCTTCGTAGTAGGCTACGGTTGGTAGGAATGCACTTTTAGCCATCATTCCAGATCC AGTGACATGTTTTTCCACTGCAAGATACTATCAGAAGCAAGTTTTCACTGTTTCTTCAGATTCAAATTTGGTTATTGTTG ATTGGATTACTAGTGGGCGCCATGAAAGTGGAGAAAAATGGGATTTTGATCTATATAAAAGCACCAACAATATATTCTTA GATGATGGTCAACCATTATTTCTAGATACGGTAATGATTTTACTGCTGTCCTTGTTATGCTAGTTATCTATTGTACTTCC AAGTTGCTTGAGCTTCTAAGATGTATAAACTATCATGAAATCTTAGCTTCCTCTCTGCTTGTAATTTCTTGGGAAATTTG TTTATAGATTTCAATCCCATAGAATGATGTCACCTAATTGCTACCCTTAACTTAATAAATTTGGATAGCTGTATCACATG CACCATTCTGTTCCCTACCACAGTTCCATTTCGGAGGCAGTTTTGCCTGGGCTTGATGGACTCTTAACCGAATATCCCTA AAATGCAAATTTAGGCTTTCACAATTTGTATGATTAAATAGCTGATACATCATTTTATTATGGGTTTATTGATTAATTTC ATTTAGGACTAATATCTAGTGCGGCAAATATTCTTAACTACGGGGAGATAATTAATGTTCTGGGTTTAAAAGCATATTTG GTACACAATAATAGTGTATACATATTTTTTCAACATCTTGACACCTTCCTCCGTTTTACCAAATAATGTTTCCCCTTCTG AATTATGTTCTGGAACAGTGATCAACCATGGCATGCAACAAATAGTAGATATAAGTAGACCTAACTGTTTTCAAAACACT GTTAAATATATGCATATTATTTGATGCTGTAACTTGTACTCCTTATTTGCAACTAAAAGTTATTGGAAAAGGAGAAACCT GCTGTTTCATTAGAAACACACAAAAGAAATAGTGAACAAAAATGTGTTTGGGTTTTTAGACTTGGATCTTCTCATTTTAG TTCCTAACATGATATGGGGTGTTGTGCTCCTTTCTTTTTAAAATATGGCGCCATCATGTTAGGAGCTACAATGACAACAT AAAAAATTGGCTTCATATCCCTACAGGGTGTTATGCCTATCTCTTTTCTGAAATGACTATATCATGTTAGTAACTAAAAT GAGAGCATCCAGATCTACCAGCATATGTCTATTTTGCATCTCTCTCTCCTGTCACGTATAGTGCACAACATGCTTTTATG CTAGTTTGAAATTTGAATTTATATAGTTTCAGGGGATTTTGGGAAAGGCAGTTTGGACCGTCTTGTATTTTGGAATTGAT TTCCTTTCCGCTCTTATTGTACTTAAAATGCTTCTTTGTTACAAACAGATGTTATTAGAGAAAGAAAAAATTGGCTGCAT AAAGGATCACATGCAGGACTACCAAGTTATTGCAATGATTGTACTCCTAGGGTGAGTGATTTAAGTTGTCTTACTTCTTG ATTTATGTTTTTTTGTATCATGAATTTAATATATTATTTTAGGCCAAATATGCAGTATATCCAGAATCTAGTGCAAGGTA ATGTCAAAAGAATTATGTCTGAGAAATTACAGTATCCTTCTGCTGCCTTGAGTCACCAAAGAGACAAGGCGGATCATTTC ATGACAAAACCAAGCTTCATGGCTTCTTGCAGTGTCTTTGGTCCTAAGGTAAATTATAAATTATTTCAATTAACTAGAAG TCTAGAATATAATGTCTAAATACTACTGCGACATACCTGGTTAAATAGTTCTTTGACTTGAGGTTGTTTCTATCTGACTT ATACTAGATCCTAGATTTTTCTTGAACCCAATTAATTTTGAAAACTTTCATAGATTCAAACGTAACACAAGTGTTGGTGC ATGCTATTGCTCATTAGAGATAAAAATATTGGAAAATTAAAAGAATTAGCGGAAACATTCCATGTTTTCTACTGTTAGAA TATTAGGGTGTTTAATCTTAGTTGGCTATGGATTGTACTAGCAGTGCTAGTACTTGATCACTTGATCTAATTATGGTCAC TTTGAAGGAGCTGTCTATAGTTTTGAATCATCAAAAAGTGATGATTTGTTGGAGTCATGAATCCTCTATTTATAATGTGA GTTTTAATAGGTAATTAGGTGAGGTTGTCCATTTATTCTAGCATAAGGGATCTTGCTAGTGCAGGGTATTGTTTATTTGG GACGCGTGTTCCAGTTGAGACAAAAGTGACTTCTCCACTAAGTTGGCTTAGTTTGTGAACTTAATAGAATACTGGTGAGG TTCTAGGTAGGATTGGGTGAGCATAAATAAGGAAATGTTGATTGCAGGATGGAGAGAATCAATGATTGGTATTTTATTAA TTTGGTGAACGGTCAGGGCTGTCTTGGTTGAATGGAGAGAATCATTAGCCTTTGTATGGCAGACCCTTTATCTTAACAAA ATAAATCCAGAATTGCTAAAAGCTTAAAACAGAGTAGCAGTGGGCCAGGAATGTGTGTACGATGGGTTTTTGAGACAAAA GGGCTACAAATTAATGGGGAACTTGTGAAAAGAGTGGGGTTGATGGAGATGGGAGTGAGTTGAGCCAGCTTTTGAGCCTA CATGCCTACTTGCAACTCAGCACATTAACAACCAAATGAACTGAAAATTTTGGTTCATTTTTAAATGAACTGAACTTGAG CTTTGACATGTTCAACCCCTTAGCTCGTGAGCTAGCTTGATATATAAATAGATACATACTTTGATAAATAGATACATACT TTGTTAAGAAGTGAATTTTGCCCATAAAAACAAAGAGACTAGCTCTTGACAAGAACAGCAAATGCAGAATATAATGGTAA ATCTAGAGTTCTGCTGATGCACAGAACCTCTAGTCCGAATAGTTACCATTTGCCTTTCTATTCATGCATTCCCTGTACTA CCTACCCTTCCCTCTAATATTCTCATTTCTCCCCAATCAAATTCTCACCTCATACTATTCCTTGCTAGCACAAGATCCTT TTATGCCCTAGATTTACCTACATGAATATTCCCTCAATTTCTGACCCTTATTCTCACCAATCTGTGTTTTTCTTTTTAAT CAGCAAATCTCTTCTTCAGGCATAGGCCCAAACCCAGTAGTTGTGTCAAAATCACCAAATCTCTTCTTCTAAGTAGACCT AACATCATCATCATCATCATCTCCGGTCAAAATAATGTCCGCTACATATGTTGTAAGCTGTCAAATACTCAATTGGGACA TGAATTCTGGCCTAGGCCCAGCCAGGGATGGGAATAATAGGGGTGTATAAACAGTTGAGAGCCCGACCAAGTTGAAGTAG ATATTTCTGTACCTATGTTTTTAAAATTCAAATTTTCATCTCTTCACTTTTCCATTTCACAGCATAAGCACATCAATTAT TTCATTTCATAGGCTCATTAGTTGCTTCAAGAGAAGAAGGGAAGTCTATCAAAGACCATTCTCCTTGGAGTAATGATATA TACACACCTCATCTTTTAAACACTTCATTTCCACCTATTTTTGTTTCTACCTCTCTCCTCTTATCATCTATCACATCTCA TATTTTCTCTCTCTTTTTCTTTTCTTCCTATCTCTCTCCTATTCCACCTCCTTCCACCTCAAAATGAGGTGTGAAGAAAA CATTTTCCTTCTCCTTGTGAAGATAATGGAGATGTGGTTCATCATGTTTATTCAGATGCACTCTCTCACTTGTGTCTAGC ATGGTTCCTTGTCTAATGGGAATTCCTCCATGTGATAGATCTCATTGCAGCATGCTAGCAGCTGCAATTGCGGAGGAGCA CGTTGTCGTAACGGAGTAAGAGAAGCCCCAATCACCTGCACCTAGGAGCGGAAATGCTCTCCACCTCCCAATCCTAGATC CATTCACGTTCCTCCGTCGTGAGTTCTCATTCGCGACAACCTCGTTGTGGTCATGCTGCGTCACCCATCACCATCGTGCC GCCCCATTGCCCTTGAACCACCACTGGCCATACCATGGATGGCGGAAGCACCACGATGGCACGACCAAGAGGTCTTGTCT TTATTTTCTCAGCAATTGTTTTCTAGCATCCAAAAAATTGGAAGCTAACCCGCCTGCATAACCCTTACATCCAATTAGCC TGTATACCGGCCAATCCGATGAACCATTCAGACGAAAATGGTTTAGGATGCGAGAGTTCACTTTTTTTCCTATTGAGATT TTTCACCTTGAAACTAACTTAATCCGTTCGATGCTTGCCCTTGGGGAATAGGCTAGGCTGAACCAACTTAAATTTTTTAA GGCCCAAGTCTGATATGTTATCTGTTACAAGACTATTTTTTCAGGTCTGACTTGGTCTTTTGAAAGCTTGGTCTAGCTTG GTAGCCTATTTAAACGTCTGCTTCATAACAAGTCCTTAAAGTAGGCCAATGAGCCTATTTGTAGATAGGTCAGCACAGAT GTAGGCTAACATGTTAAACTTTACTAAAACAAATTTTTCTATATACATGCAAACAAGATTATAACCTAATAGCTAGGGAT GGAAATAAGATGGATTATGTTGGGTTTCCTAAGGGCTGAAACTGAAAGCCTATTTAAAATCCCACTTTCTTAGTAAGATA TTTAAATAAGTCATAAGTCTATTTCTTAAATCATAATAAAGGTAAGCCTAACGTCAAGATATAATAGACTGGGCGTTTGT TAAAAGTTTTAGTATAGTATATTTGGTTTGTATATATTATTCCCACGAATGCTTTTAAAATTATTTAATTAGAAAAAAAA ACAAAAAATATGAAGGTTGGTCGGAAGTAACTTCCATTCCATGGGAATGTAAGATTCCCCGTTAAGACATAGATATAAGA TTTGTAGAAATCTTGAGTAAGTTACATGCCTGAGAATCCATCATACTCGGGAATAAATATTTTAAAACTTGTAACCAAAC CTGAGAATATTACAATCCTGACCTCACATTCCTAGAATATTTTGGGATACCTTTGTAACAAACACCCCGTATATGGCTAA ATAGATTTTAGCAAATATATAAATATATATTTTTTCAAGATATTGTAATAAAAATCTTATGGAAACATAATGATAATGAA ATAAAATATTTGTTTTAATTATATCTATTTAAATAGACTAGTTCTTCAAGTAGCCCGTCTAGCTCAGTTGGTAGAGCGCA AGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGTTTTCTTTTTATTTTATCACTTTCAATTCTTTTTG AGTTGTAGTAATCTAGTATTTTTTTAATAACTAAAATTAAAATTATAAAATTTACAATATATGTTGGCTAAATTAAATAA TGGCAAGGTAAAAAAAAATTGTTAGATGCTATAGTTTGTTGAGACACTTATGGTATCTTGACTCTGTATTATTATTACGT AATTTATGATTTAGTCATAATTGTTGCTGACTGCAACTTCATATTGTGTGCAGAAAATTGGCCTTCTTGTTCGAGTGGCT TCTGTGACAACTGAATCAGTTTACAAGTTTCTACAACATCAATTGGCTCCCTTGGAGCCAATAATTGGTGTGCGACCTTA CAGATGAAGTGTAACTGTTTTCTGACAAGCACACGGTTTTATGATTTATCATTGTAAATGCAATCAATTTGTAATTTATG AATTATTTGGAATCCAATTTAAGGATTCAGTAGAAAAGTTTAGACTGAATTCATTGCCAAAATTTTAGAAATTTAGAGCT TCCAGGAATTGGGTTCAGATTATTAGCGATTTTGCTATGAACATTATCTTATATCAATCTAACTTTGAAGTTAAATTATT AATTACAATTTTCTTTCAATGCACTTGATTAAAATAATCCCTTCTTTTATGGTGACTGAATTAAAAATAAGTTTTGTAAT TTTGTTTTGGGGGAAGTCTTGTAAGTTTTATGATAATTCATGATTTTTTAGTGGCACATTTTGCGCATTACACCAGAGAG GATCCAAATTTCCATAATGCTCGAAAGTGCCACACCTACGATGTCGATCCTTTTGGTTCT
CDS sequence (LotjaGi6g1v0021100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAAATGGTGAGGAGGTCAAAGAAAAGGAAACAGGTTCAGTGGTAGTTGAAAAAGTGGGAGGCAGATCATCAGTGAC AAGCTGCATATCAAGATATCCCTTGAAGTTCATCATACCCAAAAAGGTGGGTTCTTCCAAAACTGATGCTGTCTGGGTTT ATGCCCTCAATTTTGGAGGTGGAATTGTATCTGGTGATAATATATCATGCAAGTTTTCTGTGGGAGATGGCTGTACCATG GTGTTAACGACCCAGGGCTCCACTAAGGTCTATAAATCTGTTGGATCAAAGTGTTCTCACCAAATATTAGAGGCTACGGT TGGTAGGAATGCACTTTTAGCCATCATTCCAGATCCAGTGACATGTTTTTCCACTGCAAGATACTATCAGAAGCAAGTTT TCACTGTTTCTTCAGATTCAAATTTGGTTATTGTTGATTGGATTACTAGTGGGCGCCATGAAAGTGGAGAAAAATGGGAT TTTGATCTATATAAAAGCACCAACAATATATTCTTAGATGATGGTCAACCATTATTTCTAGATACGATGTTATTAGAGAA AGAAAAAATTGGCTGCATAAAGGATCACATGCAGGACTACCAAGTTATTGCAATGATTGTACTCCTAGGGCCAAATATGC AGTATATCCAGAATCTAGTGCAAGGTAATGTCAAAAGAATTATGTCTGAGAAATTACAGTATCCTTCTGCTGCCTTGAGT CACCAAAGAGACAAGGCGGATCATTTCATGACAAAACCAAGCTTCATGGCTTCTTGCAGTGTCTTTGGTCCTAAGAAAAT TGGCCTTCTTGTTCGAGTGGCTTCTGTGACAACTGAATCAGTTTACAAGTTTCTACAACATCAATTGGCTCCCTTGGAGC CAATAATTGGTGTGCGACCTTACAGATGA
Protein sequence (LotjaGi6g1v0021100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRNGEEVKEKETGSVVVEKVGGRSSVTSCISRYPLKFIIPKKVGSSKTDAVWVYALNFGGGIVSGDNISCKFSVGDGCTM VLTTQGSTKVYKSVGSKCSHQILEATVGRNALLAIIPDPVTCFSTARYYQKQVFTVSSDSNLVIVDWITSGRHESGEKWD FDLYKSTNNIFLDDGQPLFLDTMLLEKEKIGCIKDHMQDYQVIAMIVLLGPNMQYIQNLVQGNVKRIMSEKLQYPSAALS HQRDKADHFMTKPSFMASCSVFGPKKIGLLVRVASVTTESVYKFLQHQLAPLEPIIGVRPYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 302 | 297 | 3.8E-117 | ||
| Hamap | 11 | 293 | 283 | 18.661 | ||
| Pfam | 53 | 282 | 230 | 8.6E-60 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. | ||
| Molecular function | Nickel cation binding | Interacting selectively and non-covalently with nickel (Ni) cations. |
Expression pattern of LotjaGi6g1v0021100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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