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IPR002669

Source: InterPro

Description

IPR002669 is a Urease accessory protein UreD.

<p>UreD is a urease accessory protein. Urease hydrolyses urea into ammonia and carbamic acid [[cite:PUB00002304]]. UreD is involved in activation of the urease enzyme via the UreD-UreF-UreG-urease complex [[cite:PUB00002310]] and is required for urease nickel metallocentre assembly [[cite:PUB00004836]]. This entry includes UreH from Helicobacter pylori, which is an orthologue of UreD [[cite:PUB00070746]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006807
Biological process Nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen.
Subterm of
GO:0016151
Molecular function Nickel cation binding Interacting selectively and non-covalently with nickel (Ni) cations.
Subterm of

Associated Lotus transcripts 12

Transcript Name Description Predicted domains Domain count
Lj0g3v0068049.1
– PREDICTED: urease accessory protein ureD-like isoform 1 [Glycine max] gi|356575140|ref|XP_003555700.1|
Domains
4
Lj0g3v0068049.2
– PREDICTED: urease accessory protein ureD-like isoform 2 [Glycine max] gi|356575142|ref|XP_003555701.1|
Domains
4
Lj0g3v0252619.1
– Urease accessory protein UreD [Glycine max] gi|351727327|ref|NP_001236645.1|
Domains
4
Lj4g3v0686440.1
– PREDICTED: urease accessory protein ureD-like isoform 1 [Glycine max] gi|356575140|ref|XP_003555700.1|
Domains
5
LotjaGi6g1v0021100.1
– Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021100
Domains
4
LotjaGi6g1v0021100.2
– Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0021100
Domains
4
LotjaGi6g1v0086800_LC.1
– Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3
LotjaGi6g1v0086800_LC.2
– Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3
LotjaGi6g1v0086800_LC.3
– Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3
LotjaGi6g1v0086800_LC.4
– Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3
LotjaGi6g1v0086800_LC.5
– Urease accessory protein ureD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3
LotjaGi6g1v0086800_LC.6
– Urease accessory protein UreD; TAIR: AT2G35035.1 urease accessory protein D; Swiss-Prot: sp|Q7Y0S0|URED_ARATH Urease accessory protein D; TrEMBL-Plants: tr|K7K8Q2|K7K8Q2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0086800_LC
Domains
3

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
PTHR33643 PANTHER 1 8.33