Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010471
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 7 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.159s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4955080.1
n.a. n.a. chr1 60177410 60179308 +
2 domain predictions
 –
Lj1g3v4955090.1
n.a. Uncharacterized protein TCM_008923 [Theobroma cacao] gi|508708019|gb|EOX99915.1| chr1 60178537 60180529 -
2 domain predictions
 –
Lj3g3v2923160.1
n.a. Uncharacterized protein TCM_002116 [Theobroma cacao] gi|508701366|gb|EOX93262.1| chr3 36481293 36484013 +
2 domain predictions
 –
Lj6g3v1078570.1
n.a. Uncharacterized protein TCM_037096 [Theobroma cacao] gi|508782342|gb|EOY29598.1| chr6 12917047 12920292 +
2 domain predictions
 –
LotjaGi3g1v0469300.1
n.a. Plant/T7A14-6 protein; TAIR: AT2G32580.1 transmembrane protein, putative (DUF1068); Swiss-Prot: sp|P35620|FLHA_BACSU Flagellar biosynthesis protein FlhA; TrEMBL-Plants: tr|I3SUA6|I3SUA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0469300 LjG1.1_chr3 88481705 88488618 +
2 domain predictions
 –
LotjaGi6g1v0205700.1
n.a. ubiquitin-associated protein (DUF1068); TAIR: AT2G24290.1 ubiquitin-associated protein (DUF1068); Swiss-Prot: sp|P08964|MYO1_YEAST Myosin-1; TrEMBL-Plants: tr|I3SF95|I3SF95_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0205700 LjG1.1_chr6 50291812 50295199 +
2 domain predictions
 –
LotjaGi6g1v0290700.1
n.a. Plant/T7A14-6 protein; TAIR: AT4G04360.1 transmembrane protein, putative (DUF1068); Swiss-Prot: sp|Q9T0F4|IAN13_ARATH Immune-associated nucleotide-binding protein 13; TrEMBL-Plants: tr|K7MAS9|K7MAS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0290700 LjG1.1_chr6 60789027 60793392 -
2 domain predictions
 –