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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0290700 |
| Transcript ID | LotjaGi6g1v0290700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant/T7A14-6 protein; TAIR: AT4G04360.1 transmembrane protein, putative (DUF1068); Swiss-Prot: sp|Q9T0F4|IAN13_ARATH Immune-associated nucleotide-binding protein 13; TrEMBL-Plants: tr|K7MAS9|K7MAS9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0290700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:60789027..60793392) extracted from Lotus japonicus Gifu genome v1.2.
CGCGAATATATTGAAACCAAACCTTAACCAATTCTCAGTCAAGATCCTCTTCCCCTGTTGTCTGCCAAACCAAGAAACAA ACTGAAACAAAAAAAGATGAACAGGAAGCAGCGAAAGGTGTTCACATTGTTCATGTGGATTTTGGGATTGTGTCTAGGCG GTTACATTGTAGGACCACCCTTGTATTGGCATCTCAATGAGACCTTCGACTCCATTTCTTCTTGTCCTCCTTGCCACTGT GATTGCTCTCTTCAACCCCTTCTTTCTCTCCCAGAAGGTACTTCCATTTTTTTATAAATATATTCATTCTCCTTTCAAAT AAATCTTTTTATCTATTTCCTTTTTTACTGATCATGCTTGATTGAAAATACAATGTTTACTCCAAATCTCAGTTATTAGA AGCCATCAGTTGTTACACTCAGTTTTTTGTTCTTACATTTAAAATATGAAATATTGAAACATCATATAATCAAATTGATA TGCAAGTGTTAATTCCTTGGTCGTTTTGATGCATTCTGATTCTGCTAATATTTAGTTATTTGTTATACATTCTGCTAATC ACGGTTTCTAAGGTCTACAATTGGATTAGTTCATGCTAAATCATATAATGTGATCAATAGCTAAACTTTACAACTGACTC TGAGCCATGTAATGAAAAATAGGAAAGTGGATACATACTTTTTTAAGGTTTCTTGTGCTCATACATTGATTCTTGATTGC TAATATGGTGTCTCAACTTGTTTTTCTGCTGCAGGATTGAGCGACAATTCCATTCTAGGTTCGTTCTACTCCCTTTTTCT TCTGCAGGATTGAGTGTGCTTAGAAACATAACATGACTATCACATGATCTATGGCATGGTCACTATAACTTACAATAAGC TACAACTGATTGCTTTTGTCTGAGTGGAAATAGCCATTTGGCACGATTCCAAACACTATATTCGAATCAACTTCACTTTT ATCAAAATCAATTATAAAATCTAGAAGTTATAGTCGACACATGCACAAATTGATAACATTATTATTATCATGACTTCATG AAGCGAGTTGTCAGGAATTAATATAAAGATAAATAAAAAATTGTAAAGCCACTTTTGTGTGGCGGCCGGAGACGTGAAAA TGTGAGACTTCTCCCTATGAATAACAACTTGCACAAGTTGATTACATTATTATGATAATCACATCATGAAGCAAGTTGCG ATCAATCAATACAAAGATAAAATAAAATATTGTAAAGTCACTTTTGTGTGGCAGTTGGAGACGTGAAAGTAGTGAGGCTT TCTCCCTATAAATAACTTTGCATAAGTTGATAACATTATTATGGTCGTGAAATCATAGAGCAAGTTGTGATCAATCAATG CAAAGATTAGTAAAATGTTGTAAAACCGCTTTTGTGTGCAGTTGGAGACGTGAAAGGAGTGAGACTTCTCCAGTTCTCCC TATAAATAACAACTTACACAAGTTGATAACATTATTATGGTCCTGCCATCAATCAATACAAAGATAAAAATAAAACATTG TAAAACTACTTTTGTATGGCTGTAAGACGGAAGGGTGAGGCTTCCCCCTATAAATAGCAACTTGCACAAGTTGATAACAT TATTCCAGTCATGCCATCAAGTTTTTACTATGATTTTGGGCTTTCTTAACACTAAAGCAACAAAGAGTAGAAACTAGAAC CGGGCTAGTAACACTATTAAATATGTAAAGTGAAGTTTACATATTAATCAAATAATTTGTTTCACATTGGGGAAAATATA TGTAGTTTTGGAGGATAATAATTCTAAAAGGCATGCATAAAAGTTTAATGTATGCTACCTTTCAGTCATGGAAAAATTCA TAGTGCATTACATATATTATAGATTGCATGAGGCAAGACCCAGAGGTGAGTGAAGAGGCGGGGAAGAGTTTTATAGAGCT TTTGTCCAAAGAACTGAGGCTGAAGGAAGATAAAGCTAAGGAAAAACAAAGAGTTGCTGACATAAAAATTTTAGAGGCTA AGAAAGTAGCATCACAGTATCAAAAGGAAGCTGACAAATGCAATTCAGGGATGGAGACATGTGAGGAGGCTAGGGAAAGA GCTGAAACAACACTTGAAAATCAGATGAAAGAAACTGCTTTATGGGAGCTCAGGGCTCGCCAAAGAGGATGGTCAGATAC TACTGCAAAGAAATTTTGAGCCTATCTTTAAGCCTCTTACACTGAATGGGTACAATTATCATCTTCTTCTTGTTTCTCAG TAGTTTGTTGATTCTTCCATTTATTGATGCTTTTGCATTCACTTGATGTATTATTTAGTGAGAAGTACTTTCTCTTCATG GTCTGAGTGGTTGGCATACAAGTCAAAAGCAAAATAACTTGAATTCTCACTAACCAAATCTTGCTCTCTATTAACACAGG TATCCTCCTCCATGAGAGGACAATTCAAAATATGACTGACATTAGAATTCCAGCTTTGCAAAATAATATTTCTAGATGCC ACTAAACTAAATGCTTCATTTTATATTATAACCTACTTTCTACTCTCTGACTGTTCACTGTGGGACAATTGTGGTTTGTT GTATCAAGCCTCTCACTGAGCCAGATAAAATGGTCCCTGTCAGCTCACCTTTGTCTCCAATATCTAATCTGTCGTATGTT GTATGCTGTATCTAACTTGGAAGTGATTTCCTTTAATGCCGGAAGTATACATCTAAGCAGGTCAGTATACGGCTAAAAAG ACGTTCGAGAGAAGCGTTAGACATGTCATGGTGGAGTGTCTAACAATGCAGAAATTTCAAAGTGGTCAACAACTCCCTCG CTCAACAAGCGCATAGCAGCTCCCTGAGAGAATTTCCTAGCAAACAAGAAACACGGAACGAATGTTGAATTGGTACGACA CCATTCTATCCGGTATTCGGTCTCATAATAAACATGGCGGATGTCCTGTTCAAAAAACATAAAACATGAGATAATCATAG TAAGGTCCTAAGAATAGACTCATAAATGAGGGCAAAAAACCCGGCTCCCCCCAAAGAACTTCAAATAATGGATCCTTTCA ACCCCGTAACTGGCTAAAGTTATGTATGAGGAAGCAAAAGATAACCTTCATTTCCTTGATCCTTTTAGGGCTAGCATTTG CATAGCTGAAAGTAGCAGGATGCCAGCCTTTATTCTCCGTTTTTGACTGGTTCCACAGGGTATAGGTTATTGTTCTACGT TCAAGTTCACCTTCAAGGTCACGCATCTGGAAAGAAAACAAAAGAGAAATGCATATCATGATCTATAACATTGCAAACAT ACAAATTAATCCTTGAAGAGTTATTATAGGTCTGGTACCAAGAAATAAGAGAGAATGTGTTCATTACAGAAAGCCCTATT TCCCAACCTGCTCAATGCGGAATATAATTAGGAACGGAGAAAAGATACCAGTGAAATGCTGAGCGGGTTTGAGAGCTCAG CCCTCTCCACCGGTCCATCCTTTACAATCTGAAGGCCCCTCAACAGCCCATATTGTTCTCTTGCAAGTAACCAACTAACT AACTCTATGTTAGTTAGTGGGTTTGTTTTACAATAAAAAGACTTCTAGGGGCTGGGATCCTCTAGAGCTTCCCTACGACT ACTCTCATAGGCCCTTCTAAGTTCTAATTGGCAGTCTATTCTTATGAATACCCCTCCACCCCCAAAAGAAAAAGAAAAAC TTTCACCTTGTCACCAAGGGACGAAGAAAAAACCTCTGACAGTCTAGTTACTGATTCCCAACTGTTTTCAAAGTCAGGAA GATTCTACCATTTGACTTGTAACTCATATGCTGCTGTCAACAAGAGAGCAAGGGGTTTAACTTGCTTGTAAGCTGCAACT ACCTTCTTAAGCCATACATATAAAAATCAATATCCCAATTTTACAATCTGGATACTCCTCAACAGCTTTTGTTGTTCTCT ATATATCCTTCTACCAACTAACTAACTCTATGTTAGTAGGTTAGTTTAACAATGAAAATGACTTCTAGGGGCTGGGATCG ATCAACTAGAGCTCGCCTAAATCTACTCTCATAAACCATCTAATTGGAAGTCTACTCCTATCAAGTTACTGCACATTATT TCATTAGAGTAATTTTGAATAAAGAAGAAATGAGAATAAATAGGATTGAAGAACGCATCCCCCAAACAACAAAAGTAGTT AACAATGGAAACGACATCTCAGTATCTTACCGCAAGCAATGTCTGCACATAGTGTTCATCTGGAATACAGTTGTGCTGCT TCTGAAGTTTCTGCAGTAACACGAAAACCATAGCAACTAATTATCAGTATGAAAATAAAAATCTATACATAAATGAGTAT GGAGTAGCATCACAATATTATCAGTATAAATAACAACAGGGTTTCA
CDS sequence (LotjaGi6g1v0290700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAGGAAGCAGCGAAAGGTGTTCACATTGTTCATGTGGATTTTGGGATTGTGTCTAGGCGGTTACATTGTAGGACC ACCCTTGTATTGGCATCTCAATGAGACCTTCGACTCCATTTCTTCTTGTCCTCCTTGCCACTGTGATTGCTCTCTTCAAC CCCTTCTTTCTCTCCCAGAAGGATTGAGCGACAATTCCATTCTAGATTGCATGAGGCAAGACCCAGAGGTGAGTGAAGAG GCGGGGAAGAGTTTTATAGAGCTTTTGTCCAAAGAACTGAGGCTGAAGGAAGATAAAGCTAAGGAAAAACAAAGAGTTGC TGACATAAAAATTTTAGAGGCTAAGAAAGTAGCATCACAGTATCAAAAGGAAGCTGACAAATGCAATTCAGGGATGGAGA CATGTGAGGAGGCTAGGGAAAGAGCTGAAACAACACTTGAAAATCAGATGAAAGAAACTGCTTTATGGGAGCTCAGGGCT CGCCAAAGAGGATGGTCAGATACTACTGCAAAGAAATTTTGA
Protein sequence (LotjaGi6g1v0290700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRKQRKVFTLFMWILGLCLGGYIVGPPLYWHLNETFDSISSCPPCHCDCSLQPLLSLPEGLSDNSILDCMRQDPEVSEE AGKSFIELLSKELRLKEDKAKEKQRVADIKILEAKKVASQYQKEADKCNSGMETCEEARERAETTLENQMKETALWELRA RQRGWSDTTAKKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 172 | 172 | 1.5E-96 | – | |
| PANTHER | 1 | 172 | 172 | 1.5E-96 | – | |
| Pfam | 8 | 167 | 160 | 3.0E-73 | ||
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 12 | 33 | 22 | - | – | |
| Phobius | 34 | 173 | 140 | - | – | |
| Coils | 86 | 106 | 21 | - | – | |
| Coils | 132 | 152 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0290700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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