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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013894
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.392s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4485290.1
n.a. PREDICTED: tudor domain-containing protein 3-like isoform X1 [Cicer arietinum] gi|502149673|ref|XP_004507622.1| chr1 52805273 52813383 +
2 domain predictions
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Lj4g3v2883350.1
n.a. OSIGBa0132D06.6 [Oryza sativa Indica Group] gi|116309358|emb|CAH66440.1| chr4 38681137 38686373 +
2 domain predictions
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Lj4g3v2883350.2
n.a. OSIGBa0132D06.6 [Oryza sativa Indica Group] gi|116309358|emb|CAH66440.1| chr4 38681137 38686373 +
2 domain predictions
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LotjaGi1g1v0202200.1
n.a. Tudor domain-containing protein 3; TAIR: AT5G19950.3 tudor domain protein (DUF1767); Swiss-Prot: sp|Q5ZMS6|TDRD3_CHICK Tudor domain-containing protein 3; TrEMBL-Plants: tr|K7KWD7|K7KWD7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0202200 LjG1.1_chr1 42998608 43007111 +
2 domain predictions
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LotjaGi4g1v0418900.1
n.a. RecQ-mediated genome instability protein 1; TAIR: AT5G63540.1 recQ-mediated instability protein (DUF1767); Swiss-Prot: sp|Q7XRV0|RMI1_ORYSJ RecQ-mediated genome instability protein 1; TrEMBL-Plants: tr|I1KP59|I1KP59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0418900 LjG1.1_chr4 79441537 79446622 -
2 domain predictions
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LotjaGi4g1v0418900.2
n.a. RecQ-mediated genome instability protein 1; TAIR: AT5G63540.1 recQ-mediated instability protein (DUF1767); Swiss-Prot: sp|Q7XRV0|RMI1_ORYSJ RecQ-mediated genome instability protein 1; TrEMBL-Plants: tr|I1KP59|I1KP59_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0418900 LjG1.1_chr4 79441537 79446632 -
2 domain predictions
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