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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PF02966
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.021s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0056839.1
n.a. Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1| chr0 18530625 18534384 +
2 domain predictions
2 GO terms
Lj0g3v0247239.1
n.a. PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1| chr0 128138739 128143857 +
2 domain predictions
2 GO terms
Lj0g3v0349819.1
n.a. PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1| chr0 183735924 183737486 +
2 domain predictions
2 GO terms
Lj1g3v2429750.1
n.a. Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1| chr1 28418364 28419552 +
2 domain predictions
2 GO terms
Lj1g3v2429760.1
n.a. PREDICTED: thioredoxin-like protein 4A-like [Fragaria vesca subsp]. vesca] gi|470115421|ref|XP_004293898.1| chr1 28418364 28418484 +
2 domain predictions
2 GO terms
Lj1g3v2429780.1
n.a. Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1| chr1 28419387 28419552 +
2 domain predictions
2 GO terms
Lj5g3v1723820.1
n.a. PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1| chr5 24851282 24856390 +
2 domain predictions
2 GO terms
Lj6g3v0098580.1
n.a. Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1| chr6 1247349 1249152 -
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.1
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94959043 94963438 +
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.2
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94959829 94963299 +
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.3
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94961400 94963303 +
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.4
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94961813 94963009 +
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.5
n.a. Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94962402 94963009 +
2 domain predictions
2 GO terms
LotjaGi1g1v0450500.6
n.a. Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500 LjG1.1_chr1 94962658 94963009 +
2 domain predictions
2 GO terms
LotjaGi2g1v0158000_LC.1
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158000_LC LjG1.1_chr2 55788168 55792518 +
2 domain predictions
2 GO terms
LotjaGi2g1v0158300.1
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158300 LjG1.1_chr2 55814012 55819171 +
2 domain predictions
2 GO terms
LotjaGi2g1v0158300.2
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158300 LjG1.1_chr2 55815025 55818210 +
2 domain predictions
2 GO terms
LotjaGi5g1v0266000.1
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266000 LjG1.1_chr5 57699914 57704758 -
2 domain predictions
2 GO terms
LotjaGi5g1v0266000.2
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266000 LjG1.1_chr5 57700189 57703372 -
2 domain predictions
2 GO terms
LotjaGi5g1v0266200_LC.1
n.a. Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266200_LC LjG1.1_chr5 57783650 57788000 -
2 domain predictions
2 GO terms
LotjaGi6g1v0010700.1
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700 LjG1.1_chr6 1979275 1981930 -
2 domain predictions
2 GO terms
LotjaGi6g1v0010700.2
n.a. Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700 LjG1.1_chr6 1979346 1981959 -
2 domain predictions
2 GO terms
LotjaGi6g1v0010700.3
n.a. Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700 LjG1.1_chr6 1979855 1980243 -
2 domain predictions
2 GO terms