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GO:0000398

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description MRNA splicing, via spliceosome
Full defintion The joining together of exons from one or more primary transcripts of messenger RNA (mRNA) and the excision of intron sequences, via a spliceosomal mechanism, so that mRNA consisting only of the joined exons is produced.
Subterm of

Relationships

The relationship of GO:0000398 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCkrc
ISBN
The RNA WorldThe RNA World

Thomas R. Cech,Raymond F. Gesteland,John Fuller Atkins · ISBN: 0879695897

, 1999 · 0 pages

As both an informational molecule and a catalyst, RNA may hold clues to the emergence of genetic self-replication and the origins of life. The first, 1993 edition of this important work was acclaimed as unique and authoritative. The new edition has been revised, updated, and extended, and offers a completely current perspective on the modern world of RNA and the light it sheds on a prebiotic era perhaps dominated by this extraordinarily versatile molecule. This book is essential reading for everyone interested in the biology of nucleic acids, and is a valuable resource for teaching as well as investigative science.

Associated Lotus transcripts 152

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0004639.1
– Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao] gi|508786323|gb|EOY33579.1|
GO terms
3
Lj0g3v0037709.1
– PREDICTED: intron-binding protein aquarius-like [Glycine max] gi|356574068|ref|XP_003555174.1|
GO terms
2
Lj0g3v0056839.1
– Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1|
GO terms
2
Lj0g3v0093439.1
– Os04g0663300 [Oryza sativa Japonica Group] gi|115461126|ref|NP_001054163.1|
GO terms
1
Lj0g3v0114949.1
– Os04g0663300 [Oryza sativa Japonica Group] gi|115461126|ref|NP_001054163.1|
GO terms
1
Lj0g3v0173139.1
– Pre-mRNA-processing factor [Medicago truncatula] gi|357440851|ref|XP_003590703.1|
GO terms
2
Lj0g3v0180079.1
– Splicing factor U2af subunit isoform 1 [Zea mays] gi|413948479|gb|AFW81128.1|
GO terms
3
Lj0g3v0247239.1
– PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1|
GO terms
2
Lj0g3v0252439.1
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 1-like [Cicer arietinum] gi|502126028|ref|XP_004499153.1|
GO terms
1
Lj0g3v0255039.1
– Unknown protein [Arabidopsis thaliana] gi|15451186|gb|AAK96864.1|
GO terms
2
Lj0g3v0265099.1
– PREDICTED: LOW QUALITY PROTEIN: protein snwA-like [Glycine max] gi|356558906|ref|XP_003547743.1|
GO terms
2
Lj0g3v0273799.1
– CWC15-like protein [Medicago truncatula] gi|357476859|ref|XP_003608715.1|
GO terms
2
Lj0g3v0290279.1
– PREDICTED: zinc finger CCCH domain-containing protein 5-like [Glycine max] gi|356528629|ref|XP_003532902.1|
GO terms
3
Lj0g3v0290279.2
– PREDICTED: zinc finger CCCH domain-containing protein 5-like [Glycine max] gi|356528629|ref|XP_003532902.1|
GO terms
3
Lj0g3v0290329.1
– Zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana] gi|15218489|ref|NP_172503.1|
GO terms
3
Lj0g3v0290329.2
– U2 auxiliary factor small subunit [Medicago truncatula] gi|140053487|gb|ABO80462.1|
GO terms
3
Lj0g3v0290329.3
– Zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana] gi|15218489|ref|NP_172503.1|
GO terms
3
Lj0g3v0290349.1
– Zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana] gi|15218489|ref|NP_172503.1|
GO terms
3
Lj0g3v0298839.1
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
Lj0g3v0332639.1
– PREDICTED: pre-mRNA-processing factor 6-like [Cicer arietinum] gi|502167664|ref|XP_004514211.1|
GO terms
1
Lj0g3v0349819.1
– PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1|
GO terms
2
Lj1g3v0969930.1
– PREDICTED: splicing factor 3A subunit 3-like [Cicer arietinum] gi|502136296|ref|XP_004502635.1|
GO terms
3
Lj1g3v0969930.2
– PREDICTED: splicing factor 3A subunit 3-like [Fragaria vesca subsp]. vesca] gi|470142668|ref|XP_004307025.1|
GO terms
3
Lj1g3v2429750.1
– Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1|
GO terms
2
Lj1g3v2429760.1
– PREDICTED: thioredoxin-like protein 4A-like [Fragaria vesca subsp]. vesca] gi|470115421|ref|XP_004293898.1|
GO terms
2
Lj1g3v2429780.1
– Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1|
GO terms
2
Lj1g3v3765010.1
– PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X2 [Cicer arietinum] gi|502100538|ref|XP_004491744.1|
GO terms
3
Lj1g3v3765010.2
– PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like isoform X1 [Cicer arietinum] gi|502100534|ref|XP_004491743.1|
GO terms
3
Lj1g3v4694450.1
– PREDICTED: splicing factor U2af small subunit B-like [Glycine max] gi|356505320|ref|XP_003521439.1|
GO terms
3
Lj3g3v0044310.1
– Pre-mRNA-processing-splicing factor [Medicago truncatula] gi|357455267|ref|XP_003597914.1|
GO terms
2
Lj3g3v0044310.2
– Pre-mRNA-processing-splicing factor [Medicago truncatula] gi|357455267|ref|XP_003597914.1|
GO terms
2
Lj3g3v0044310.3
– PREDICTED: pre-mRNA-processing-splicing factor 8-like [Cicer arietinum] gi|502080722|ref|XP_004486659.1|
GO terms
2
Lj3g3v0478010.1
– PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine max] gi|356512406|ref|XP_003524910.1|
GO terms
2
Lj3g3v1132330.3
– Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao] gi|508786323|gb|EOY33579.1|
GO terms
3
Lj3g3v2807960.1
– PREDICTED: pre-mRNA-processing factor 6-like [Glycine max] gi|356543817|ref|XP_003540356.1|
GO terms
1
Lj3g3v3006550.1
– Zinc finger C-x8-C-x5-C-x3-H type family protein [Theobroma cacao] gi|508786323|gb|EOY33579.1|
GO terms
3
Lj3g3v3374690.1
– PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Glycine max] gi|356571467|ref|XP_003553898.1|
GO terms
3
Lj3g3v3525970.1
– PREDICTED: SNW domain-containing protein 1-like [Cucumis sativus] gi|449443171|ref|XP_004139354.1|
GO terms
2
Lj3g3v3689890.1
– SNW domain-containing protein [Medicago truncatula] gi|357448543|ref|XP_003594547.1|
GO terms
2
Lj3g3v3689900.1
– SNW domain-containing protein [Medicago truncatula] gi|357448543|ref|XP_003594547.1|
GO terms
2
Lj3g3v3725550.1
– PREDICTED: branchpoint-bridging protein-like isoform X1 [Cicer arietinum] gi|502169018|ref|XP_004514517.1|
GO terms
3
Lj4g3v1248000.1
– PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max] gi|356508935|ref|XP_003523208.1|
GO terms
2
Lj4g3v1259280.1
– PREDICTED: protein CWC15 homolog [Glycine max] gi|356563326|ref|XP_003549915.1|
GO terms
2
Lj4g3v1259280.2
– PREDICTED: protein CWC15 homolog [Glycine max] gi|356563326|ref|XP_003549915.1|
GO terms
2
Lj4g3v2573940.1
– PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine max] gi|356512406|ref|XP_003524910.1|
GO terms
2
Lj5g3v0292810.1
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
Lj5g3v0292810.2
– PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max] gi|356562363|ref|XP_003549441.1|
GO terms
2
Lj5g3v0626530.1
– PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max] gi|356508935|ref|XP_003523208.1|
GO terms
2
Lj5g3v1263990.1
– C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma cacao] gi|508727165|gb|EOY19062.1|
GO terms
3
Lj5g3v1671380.1
– PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1 [Cicer arietinum] gi|502117894|ref|XP_004495998.1|
GO terms
3
Lj5g3v1723820.1
– PREDICTED: thioredoxin-like protein 4B-like isoform X1 [Cicer arietinum] gi|502118226|ref|XP_004496162.1|
GO terms
2
Lj5g3v2288940.1
– PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Glycine max] gi|356495750|ref|XP_003516736.1|
GO terms
2
Lj6g3v0098580.1
– Thioredoxin-like 4A [Medicago truncatula] gi|357439853|ref|XP_003590204.1|
GO terms
2
Lj6g3v0217160.1
– U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula] gi|357441861|ref|XP_003591208.1|
GO terms
1
LotjaGi1g1v0136600.1
– Hydroxyproline-rich glycoprotein family protein, putative; TAIR: AT4G24500.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9JKS4|LDB3_MOUSE LIM domain-binding protein 3; TrEMBL-Plants: tr|I1MB09|I1MB09_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0136600
GO terms
3
LotjaGi1g1v0210600.1
– Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A072UDN9|A0A072UDN9_MEDTR Pre-mRNA-splicing factor SLU7-like protein; Found in the gene: LotjaGi1g1v0210600
GO terms
3
LotjaGi1g1v0210600.2
– Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|I1N2J3|I1N2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0210600
GO terms
3
LotjaGi1g1v0275500.1
– Protein CWC15 like; TAIR: AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein; Swiss-Prot: sp|Q6NUB2|CW15A_XENLA Protein CWC15 homolog A; TrEMBL-Plants: tr|I3SEE4|I3SEE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0275500
GO terms
2
LotjaGi1g1v0275500.2
– Protein CWC15 like; TAIR: AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein; Swiss-Prot: sp|Q6NUB2|CW15A_XENLA Protein CWC15 homolog A; TrEMBL-Plants: tr|I3SEE4|I3SEE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0275500
GO terms
2
LotjaGi1g1v0283800.1
– Splicing factor 3A subunit 3; TAIR: AT5G06160.1 splicing factor-like protein; Swiss-Prot: sp|Q9FG01|ATO_ARATH Splicing factor SF3a60 homolog; TrEMBL-Plants: tr|A0A151TS58|A0A151TS58_CAJCA Splicing factor 3A subunit 3; Found in the gene: LotjaGi1g1v0283800
GO terms
3
LotjaGi1g1v0382600.1
– U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|K7KTH6|K7KTH6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0382600
GO terms
2
LotjaGi1g1v0450500.1
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0450500.2
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0450500.3
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0450500.4
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|B8BHK6|B8BHK6_ORYSI Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0450500.5
– Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0450500.6
– Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi1g1v0450500
GO terms
2
LotjaGi1g1v0507900_LC.1
– Pre-mRNA splicing factor, putative; TAIR: AT4G03430.1 pre-mRNA splicing factor-like protein; Swiss-Prot: sp|Q9ZT71|STA1_ARATH Protein STABILIZED1; TrEMBL-Plants: tr|V7BV27|V7BV27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0507900_LC
GO terms
1
LotjaGi1g1v0598200.1
– Small nuclear ribonucleoprotein; TAIR: AT1G76860.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9C6K5|LSM3B_ARATH Sm-like protein LSM3B; TrEMBL-Plants: tr|A0A0J8FV31|A0A0J8FV31_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0598200
GO terms
2
LotjaGi1g1v0618800.1
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
GO terms
3
LotjaGi1g1v0618800.2
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|I1MLN7|I1MLN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
GO terms
3
LotjaGi1g1v0618800.3
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
GO terms
3
LotjaGi1g1v0618800.4
– U4/U6 small nuclear ribonucleoprotein Prp31; TAIR: AT1G60170.1 pre-mRNA processing ribonucleoprotein binding region-containing protein; Swiss-Prot: sp|Q8RXN6|PRP31_ARATH U4/U6 small nuclear ribonucleoprotein Prp31 homolog; TrEMBL-Plants: tr|A0A0S3TBB0|A0A0S3TBB0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0618800
GO terms
3
LotjaGi1g1v0680100.1
– Splicing factor U2af small subunit A-like protein; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|I3SLP5|I3SLP5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0680100
GO terms
3
LotjaGi1g1v0744200_LC.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|F6HQ26|RU1C_VITVI U1 small nuclear ribonucleoprotein C; TrEMBL-Plants: tr|A0A072U5H3|A0A072U5H3_MEDTR U1 small nuclear ribonucleoprotein C; Found in the gene: LotjaGi1g1v0744200_LC
GO terms
3
LotjaGi1g1v0747900.1
– Zinc finger matrin-type 2; TAIR: AT3G05760.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q96NC0|ZMAT2_HUMAN Zinc finger matrin-type protein 2; TrEMBL-Plants: tr|I3SLF9|I3SLF9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0747900
GO terms
2
LotjaGi1g1v0765900.1
– Small nuclear ribonucleoprotein SM D3, putative; TAIR: AT5G27720.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protein LSm4; TrEMBL-Plants: tr|A0A1J7ICX8|A0A1J7ICX8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0765900
GO terms
2
LotjaGi1g1v0794800.1
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|A0A151TY13|A0A151TY13_CAJCA Arginine/serine-rich-splicing factor RSP31; Found in the gene: LotjaGi1g1v0794800
GO terms
2
LotjaGi1g1v0794800.2
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|A0A151TY13|A0A151TY13_CAJCA Arginine/serine-rich-splicing factor RSP31; Found in the gene: LotjaGi1g1v0794800
GO terms
2
LotjaGi2g1v0011500.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|A0A1D1Z0R2|A0A1D1Z0R2_9ARAE Splicing factor U2af small subunit A; Found in the gene: LotjaGi2g1v0011500
GO terms
3
LotjaGi2g1v0011500.2
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9FMY5|U2AFB_ARATH Splicing factor U2af small subunit B; TrEMBL-Plants: tr|A0A1D1Z0R2|A0A1D1Z0R2_9ARAE Splicing factor U2af small subunit A; Found in the gene: LotjaGi2g1v0011500
GO terms
3
LotjaGi2g1v0024500.1
– Embryo defective 2765; TAIR: AT2G38770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O60306|AQR_HUMAN Intron-binding protein aquarius; TrEMBL-Plants: tr|I1NCV6|I1NCV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0024500
GO terms
2
LotjaGi2g1v0024500.2
– Embryo defective 2765; TAIR: AT2G38770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|O60306|AQR_HUMAN Intron-binding protein aquarius; TrEMBL-Plants: tr|I1NCV6|I1NCV6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0024500
GO terms
2
LotjaGi2g1v0132800.1
– Small nuclear ribonucleoprotein; TAIR: AT1G76860.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9C6K5|LSM3B_ARATH Sm-like protein LSM3B; TrEMBL-Plants: tr|Q5N9F1|Q5N9F1_ORYSJ protein; Found in the gene: LotjaGi2g1v0132800
GO terms
2
LotjaGi2g1v0158000_LC.1
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158000_LC
GO terms
2
LotjaGi2g1v0158300.1
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158300
GO terms
2
LotjaGi2g1v0158300.2
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0158300
GO terms
2
LotjaGi3g1v0008200.1
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
GO terms
2
LotjaGi3g1v0008200.2
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
GO terms
2
LotjaGi3g1v0008200.3
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
GO terms
2
LotjaGi3g1v0008200.4
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|V7BXW4|V7BXW4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0008200
GO terms
2
LotjaGi3g1v0008200.5
– Pre-mRNA-processing-splicing factor 8; TAIR: AT1G80070.1 Pre-mRNA-processing-splicing factor; Swiss-Prot: sp|Q9SSD2|PRP8A_ARATH Pre-mRNA-processing-splicing factor 8A; TrEMBL-Plants: tr|A0A151SPN6|A0A151SPN6_CAJCA Pre-mRNA-processing-splicing factor 8; Found in the gene: LotjaGi3g1v0008200
GO terms
2
LotjaGi3g1v0058700.1
– Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700
GO terms
2
LotjaGi3g1v0058700.2
– Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700
GO terms
2
LotjaGi3g1v0058700.3
– Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700
GO terms
2
LotjaGi3g1v0058700.4
– Small nuclear ribonucleoprotein family protein; TAIR: AT2G03870.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q9SI54|LSM7_ARATH Sm-like protein LSM7; TrEMBL-Plants: tr|I3SC15|I3SC15_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058700
GO terms
2
LotjaGi3g1v0172600.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A; TrEMBL-Plants: tr|A0A1J7IB44|A0A1J7IB44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0172600
GO terms
3
LotjaGi3g1v0248200.1
– PHD finger-like domain-containing protein 5A; TAIR: AT1G07170.1 PHF5-like protein; Swiss-Prot: sp|P0DI19|PHF5A_ARATH PHD finger-like domain-containing protein 5A; TrEMBL-Plants: tr|M8CB49|M8CB49_AEGTA Zinc finger CCCH domain-containing protein 30; Found in the gene: LotjaGi3g1v0248200
GO terms
1
LotjaGi3g1v0248200.2
– PHD finger-like domain-containing protein 5A; TAIR: AT1G07170.1 PHF5-like protein; Swiss-Prot: sp|P0DI19|PHF5A_ARATH PHD finger-like domain-containing protein 5A; TrEMBL-Plants: tr|M8CB49|M8CB49_AEGTA Zinc finger CCCH domain-containing protein 30; Found in the gene: LotjaGi3g1v0248200
GO terms
1
LotjaGi3g1v0253500.1
– U6 snRNA-associated Sm-like protein; TAIR: AT2G43810.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|O22823|LSM6B_ARATH Sm-like protein LSM36B; TrEMBL-Plants: tr|I3SM22|I3SM22_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0253500
GO terms
2
LotjaGi3g1v0302300.1
– SART-1 family protein; TAIR: AT5G16780.1 SART-1 family; Swiss-Prot: sp|Q9LFE0|DOT2_ARATH SART-1 family protein DOT2; TrEMBL-Plants: tr|K7L895|K7L895_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0302300
GO terms
1
LotjaGi3g1v0399000.1
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|I1KHT0|I1KHT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.2
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|I1KHT0|I1KHT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.3
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|I1KHT1|I1KHT1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.4
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|G7LAU9|G7LAU9_MEDTR RNA-binding (RRM/RBD/RNP motif) family protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.5
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|G7LAU9|G7LAU9_MEDTR RNA-binding (RRM/RBD/RNP motif) family protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.6
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|I1KHT0|I1KHT0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0399000.7
– Arginine/serine-rich splicing factor, putative; TAIR: AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|P92964|SRS31_ARATH Serine/arginine-rich splicing factor RS31; TrEMBL-Plants: tr|A0A151SIS4|A0A151SIS4_CAJCA Arginine/serine-rich-splicing factor RSP31; Found in the gene: LotjaGi3g1v0399000
GO terms
2
LotjaGi3g1v0443200.1
– Pre-mRNA splicing factor-like protein; TAIR: AT4G03430.1 pre-mRNA splicing factor-like protein; Swiss-Prot: sp|Q9ZT71|STA1_ARATH Protein STABILIZED1; TrEMBL-Plants: tr|V7BV27|V7BV27_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0443200
GO terms
1
LotjaGi3g1v0481000.1
– Splicing factor U2af small subunit A; TAIR: AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9ZQW8|U2AFA_ORYSJ Splicing factor U2af small subunit A; TrEMBL-Plants: tr|A0A1J7IB44|A0A1J7IB44_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0481000
GO terms
3
LotjaGi3g1v0526300.1
– U11/U12 small nuclear ribonucleoprotein 25 kDa-like protein; TAIR: AT3G07860.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3SEG9|I3SEG9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0526300
GO terms
2
LotjaGi3g1v0529900.1
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0529900
GO terms
2
LotjaGi3g1v0529900.2
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0529900
GO terms
2
LotjaGi3g1v0529900.3
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0529900
GO terms
2
LotjaGi3g1v0549500.1
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0549500
GO terms
2
LotjaGi3g1v0549500.2
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0549500
GO terms
2
LotjaGi3g1v0549500.3
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0549500
GO terms
2
LotjaGi3g1v0549500.4
– SNW domain-containing 1; TAIR: AT1G77180.1 chromatin protein family; Swiss-Prot: sp|O80653|SKIP_ARATH SNW/SKI-interacting protein; TrEMBL-Plants: tr|A0A1J7HB65|A0A1J7HB65_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0549500
GO terms
2
LotjaGi3g1v0552600.1
– RNA-binding protein 3; TAIR: AT5G51300.1 splicing factor-like protein; Swiss-Prot: sp|P0CO45|BBP_CRYNB Branchpoint-bridging protein; TrEMBL-Plants: tr|I1L5P7|I1L5P7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0552600
GO terms
3
LotjaGi4g1v0071400.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT1G49590.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|Q7XA66|ZOP1_ARATH Zinc finger protein ZOP1; TrEMBL-Plants: tr|I3S6A8|I3S6A8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0071400
GO terms
1
LotjaGi4g1v0203400.1
– Protein CWC15 like; TAIR: AT3G13200.1 Cwf15 / Cwc15 cell cycle control family protein; Swiss-Prot: sp|Q6NUB2|CW15A_XENLA Protein CWC15 homolog A; TrEMBL-Plants: tr|I3SEE4|I3SEE4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0203400
GO terms
2
LotjaGi4g1v0236700_LC.1
– Arginine/serine-rich coiled coil protein; TAIR: AT3G48120.1 serine/arginine-rich splicing factor; Swiss-Prot: sp|Q9AS36|CCL11_ORYSJ Cyclin-L1-1; TrEMBL-Plants: tr|A0A1J7HF63|A0A1J7HF63_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0236700_LC
GO terms
2
LotjaGi4g1v0301200.1
– Small nuclear ribonucleoprotein; TAIR: AT4G30220.1 small nuclear ribonucleoprotein F; Swiss-Prot: sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F; TrEMBL-Plants: tr|I3SY08|I3SY08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0301200
GO terms
2
LotjaGi4g1v0388700.1
– Splicing factor 3B, subunit 5; TAIR: AT4G14342.2 Splicing factor 3B subunit 5/RDS3 complex subunit 10; Swiss-Prot: sp|P58728|SF3BB_ARATH Uncharacterized protein At4g14342; TrEMBL-Plants: tr|I3SC56|I3SC56_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0388700
GO terms
1
LotjaGi5g1v0029600.1
– Small nuclear ribonucleoprotein; TAIR: AT4G30220.1 small nuclear ribonucleoprotein F; Swiss-Prot: sp|Q9SUM2|RUXF_ARATH Probable small nuclear ribonucleoprotein F; TrEMBL-Plants: tr|I3SY08|I3SY08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0029600
GO terms
2
LotjaGi5g1v0035100.1
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
GO terms
3
LotjaGi5g1v0035100.2
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
GO terms
3
LotjaGi5g1v0035100.3
– Zinc finger CCCH domain protein, putative; TAIR: AT1G10320.2 Zinc finger C-x8-C-x5-C-x3-H type family protein; Swiss-Prot: sp|Q9SY74|C3H5_ARATH Zinc finger CCCH domain-containing protein 5; TrEMBL-Plants: tr|A0A178W6J5|A0A178W6J5_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0035100
GO terms
3
LotjaGi5g1v0059700.1
– U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3T5J9|I3T5J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0059700
GO terms
2
LotjaGi5g1v0059700.2
– U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TAIR: AT4G32270.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q84WS8|U1125_ARATH U11/U12 small nuclear ribonucleoprotein 25 kDa protein; TrEMBL-Plants: tr|I3T5J9|I3T5J9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0059700
GO terms
2
LotjaGi5g1v0161000.1
– Transducin/WD-like repeat-protein; TAIR: AT1G10580.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17; TrEMBL-Plants: tr|A0A072V0M7|A0A072V0M7_MEDTR Pre-mRNA splicing factor; Found in the gene: LotjaGi5g1v0161000
GO terms
2
LotjaGi5g1v0161000.2
– Transducin/WD-like repeat-protein; TAIR: AT1G10580.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|O60508|PRP17_HUMAN Pre-mRNA-processing factor 17; TrEMBL-Plants: tr|A0A072V0M7|A0A072V0M7_MEDTR Pre-mRNA splicing factor; Found in the gene: LotjaGi5g1v0161000
GO terms
2
LotjaGi5g1v0190800.1
– Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800
GO terms
3
LotjaGi5g1v0190800.2
– Pre-mRNA-splicing factor SLU7-like protein; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|A2YQU8|SLU7_ORYSI Pre-mRNA-splicing factor SLU7; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800
GO terms
3
LotjaGi5g1v0190800.3
– Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|A2YQU8|SLU7_ORYSI Pre-mRNA-splicing factor SLU7; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800
GO terms
3
LotjaGi5g1v0190800.4
– Pre-mRNA-splicing factor SLU7; TAIR: AT1G65660.1 Pre-mRNA splicing Prp18-interacting factor; Swiss-Prot: sp|Q9SHY8|SLU7A_ARATH Pre-mRNA-splicing factor SLU7-A; TrEMBL-Plants: tr|A0A0A0LFN9|A0A0A0LFN9_CUCSA Uncharacterized protein; Found in the gene: LotjaGi5g1v0190800
GO terms
3
LotjaGi5g1v0202800.1
– RNA binding protein, putative; TAIR: AT5G16260.1 RNA binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q5RB63|HTSF1_PONAB HIV Tat-specific factor 1 homolog; TrEMBL-Plants: tr|A0A0B2Q0D8|A0A0B2Q0D8_GLYSO HIV Tat-specific factor 1 like; Found in the gene: LotjaGi5g1v0202800
GO terms
1
LotjaGi5g1v0251400.1
– Small nuclear ribonucleoprotein SM D3, putative; TAIR: AT5G27720.1 Small nuclear ribonucleoprotein family protein; Swiss-Prot: sp|Q43582|LSM4_TOBAC Probable U6 snRNA-associated Sm-like protein LSm4; TrEMBL-Plants: tr|A0A1J7ICX8|A0A1J7ICX8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0251400
GO terms
2
LotjaGi5g1v0261800.1
– U1 small nuclear ribonucleoprotein C; TAIR: AT4G03120.1 C2H2 and C2HC zinc fingers superfamily protein; Swiss-Prot: sp|F6HQ26|RU1C_VITVI U1 small nuclear ribonucleoprotein C; TrEMBL-Plants: tr|I3S8F7|I3S8F7_LOTJA U1 small nuclear ribonucleoprotein C; Found in the gene: LotjaGi5g1v0261800
GO terms
3
LotjaGi5g1v0266000.1
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266000
GO terms
2
LotjaGi5g1v0266000.2
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266000
GO terms
2
LotjaGi5g1v0266200_LC.1
– Thioredoxin-like protein 4B; TAIR: AT3G24730.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9NX01|TXN4B_HUMAN Thioredoxin-like protein 4B; TrEMBL-Plants: tr|A0A1J7GMI2|A0A1J7GMI2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0266200_LC
GO terms
2
LotjaGi5g1v0359600.1
– U4/U6 small nuclear ribonucleoprotein Prp3; TAIR: AT1G28060.1 Pre-mRNA-splicing factor 3; Swiss-Prot: sp|Q9C7E7|RDM16_ARATH Protein RDM16; TrEMBL-Plants: tr|I1JAI8|I1JAI8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0359600
GO terms
2
LotjaGi5g1v0359600.2
– U4/U6 small nuclear ribonucleoprotein Prp3; TAIR: AT1G28060.1 Pre-mRNA-splicing factor 3; Swiss-Prot: sp|Q9C7E7|RDM16_ARATH Protein RDM16; TrEMBL-Plants: tr|A0A151SCZ2|A0A151SCZ2_CAJCA U4/U6 small nuclear ribonucleoprotein Prp3; Found in the gene: LotjaGi5g1v0359600
GO terms
2
LotjaGi5g1v0359600.3
– U4/U6 small nuclear ribonucleoprotein Prp3; TAIR: AT1G28060.1 Pre-mRNA-splicing factor 3; Swiss-Prot: sp|Q9C7E7|RDM16_ARATH Protein RDM16; TrEMBL-Plants: tr|A0A151SCZ2|A0A151SCZ2_CAJCA U4/U6 small nuclear ribonucleoprotein Prp3; Found in the gene: LotjaGi5g1v0359600
GO terms
2
LotjaGi6g1v0008600.1
– Transducin/WD40 repeat protein; TAIR: AT2G33340.1 MOS4-associated complex 3B; Swiss-Prot: sp|O22785|PR19B_ARATH Pre-mRNA-processing factor 19 homolog 2; TrEMBL-Plants: tr|I1NEN5|I1NEN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0008600
GO terms
4
LotjaGi6g1v0010700.1
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700
GO terms
2
LotjaGi6g1v0010700.2
– Thioredoxin; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700
GO terms
2
LotjaGi6g1v0010700.3
– Thioredoxin-like protein 4A; TAIR: AT5G08290.1 mRNA splicing factor, thioredoxin-like U5 snRNP; Swiss-Prot: sp|Q9FE62|YLS8_ARATH Thioredoxin-like protein YLS8; TrEMBL-Plants: tr|A0A059BG33|A0A059BG33_EUCGR Uncharacterized protein; Found in the gene: LotjaGi6g1v0010700
GO terms
2
LotjaGi6g1v0025300_LC.1
– U4/U6.U5 tri-snRNP-associated protein 1; TAIR: AT5G16780.1 SART-1 family; Swiss-Prot: sp|Q9LFE0|DOT2_ARATH SART-1 family protein DOT2; TrEMBL-Plants: tr|V7AMX6|V7AMX6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0025300_LC
GO terms
1
LotjaGi6g1v0123000.1
– PHD finger-like domain-containing protein 5A; TAIR: AT1G07170.1 PHF5-like protein; Swiss-Prot: sp|P0DI19|PHF5A_ARATH PHD finger-like domain-containing protein 5A; TrEMBL-Plants: tr|M8CB49|M8CB49_AEGTA Zinc finger CCCH domain-containing protein 30; Found in the gene: LotjaGi6g1v0123000
GO terms
1
LotjaGi6g1v0123000.2
– PHD finger-like domain-containing protein 5A; TAIR: AT1G07170.1 PHF5-like protein; Swiss-Prot: sp|P0DI19|PHF5A_ARATH PHD finger-like domain-containing protein 5A; TrEMBL-Plants: tr|M8CB49|M8CB49_AEGTA Zinc finger CCCH domain-containing protein 30; Found in the gene: LotjaGi6g1v0123000
GO terms
1

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0000398
Biological process MRNA splicing, via spliceosome 1 0.66