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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PR00111
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 80 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.044s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0089829.1
n.a. PREDICTED: haloalkane dehalogenase-like isoform X1 [Cicer arietinum] gi|502147891|ref|XP_004506956.1| chr0 36928509 36932780 -
2 domain predictions
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Lj0g3v0107429.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357496923|ref|XP_003618750.1| chr0 46341291 46346480 -
2 domain predictions
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Lj0g3v0107429.2
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356545758|ref|XP_003541302.1| chr0 46341291 46346228 -
2 domain predictions
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Lj0g3v0131869.1
n.a. Monoacylglycerol lipase ABHD6 [Medicago truncatula] gi|357463311|ref|XP_003601937.1| chr0 60095504 60099075 -
2 domain predictions
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Lj0g3v0194809.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 95023111 95027688 +
2 domain predictions
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Lj0g3v0235999.1
n.a. Monoacylglycerol lipase ABHD6 [Medicago truncatula] gi|357463311|ref|XP_003601937.1| chr0 122312460 122313323 +
2 domain predictions
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Lj0g3v0247169.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 128090570 128095147 -
2 domain predictions
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Lj0g3v0300609.1
n.a. Abhydrolase domain-containing protein [Medicago truncatula] gi|357438167|ref|XP_003589359.1| chr0 156219705 156224035 +
2 domain predictions
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Lj1g3v1788330.1
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Cicer arietinum] gi|502132566|ref|XP_004501423.1| chr1 21458502 21460463 -
2 domain predictions
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Lj1g3v2082100.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356507933|ref|XP_003522717.1| chr1 24614362 24617852 +
2 domain predictions
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Lj1g3v2143330.1
n.a. PREDICTED: abhydrolase domain-containing protein 4-like [Glycine max] gi|356509809|ref|XP_003523638.1| chr1 25898804 25904729 -
2 domain predictions
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Lj1g3v3315210.1
n.a. PREDICTED: monoglyceride lipase-like isoform X1 [Cicer arietinum] gi|502090066|ref|XP_004489110.1| chr1 37037609 37041216 -
2 domain predictions
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Lj1g3v3315210.2
n.a. PREDICTED: monoglyceride lipase-like isoform X2 [Cicer arietinum] gi|502090069|ref|XP_004489111.1| chr1 37037609 37041216 -
2 domain predictions
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Lj1g3v3729360.1
n.a. Epoxide hydrolase, partial [Medicago truncatula] gi|358347156|ref|XP_003637627.1| chr1 42939417 42940902 -
2 domain predictions
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Lj1g3v3729370.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356548757|ref|XP_003542766.1| chr1 42943005 42945172 -
2 domain predictions
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Lj1g3v4012850.1
n.a. PREDICTED: lipase 1-like [Glycine max] gi|356506198|ref|XP_003521874.1| chr1 47512376 47514692 +
2 domain predictions
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Lj1g3v4156040.2
n.a. PREDICTED: proline iminopeptidase-like [Glycine max] gi|356554862|ref|XP_003545761.1| chr1 49423074 49428147 +
2 domain predictions
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Lj1g3v4875750.1
n.a. PREDICTED: bifunctional epoxide hydrolase 2-like [Cicer arietinum] gi|502112604|ref|XP_004494384.1| chr1 59216553 59219780 +
2 domain predictions
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Lj2g3v0726320.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356531204|ref|XP_003534168.1| chr2 11495581 11498441 -
2 domain predictions
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Lj2g3v1252770.1
n.a. 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase [Medicago truncatula] gi|357487589|ref|XP_003614082.1| chr2 19953116 19958149 +
2 domain predictions
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Lj2g3v1757170.1
n.a. 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase [Medicago truncatula] gi|357483439|ref|XP_003612006.1| chr2 26965734 26967127 -
2 domain predictions
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Lj4g3v0450560.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356548757|ref|XP_003542766.1| chr4 6354024 6360468 -
2 domain predictions
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Lj4g3v0962160.1
n.a. PREDICTED: epoxide hydrolase 4-like [Glycine max] gi|356503026|ref|XP_003520313.1| chr4 14030229 14035387 +
2 domain predictions
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Lj4g3v0962160.2
n.a. PREDICTED: epoxide hydrolase 4-like [Glycine max] gi|356503026|ref|XP_003520313.1| chr4 14030229 14046163 +
2 domain predictions
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Lj4g3v0972360.1
n.a. Alpha/beta-Hydrolases superfamily protein [Theobroma cacao] gi|508699152|gb|EOX91048.1| chr4 14145801 14150460 -
2 domain predictions
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Lj4g3v1120520.1
n.a. PREDICTED: proline iminopeptidase-like [Glycine max] gi|356554862|ref|XP_003545761.1| chr4 16865852 16869014 +
2 domain predictions
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Lj4g3v2309260.1
n.a. PREDICTED: epoxide hydrolase 2-like [Glycine max] gi|356564247|ref|XP_003550367.1| chr4 32113408 32115100 +
2 domain predictions
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Lj5g3v0877170.2
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Glycine max] gi|356550775|ref|XP_003543759.1| chr5 12987187 12990489 -
2 domain predictions
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Lj5g3v1259860.1
n.a. PREDICTED: 2-hydroxymuconic semialdehyde hydrolase-like [Glycine max] gi|356533695|ref|XP_003535395.1| chr5 20072082 20076160 +
2 domain predictions
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Lj5g3v1498320.1
n.a. Epoxide hydrolase [Medicago truncatula] gi|357441775|ref|XP_003591165.1| chr5 21932623 21935945 -
2 domain predictions
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Lj5g3v2183870.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502120794|ref|XP_004497084.1| chr5 31744287 31747466 +
2 domain predictions
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Lj5g3v2288610.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356574985|ref|XP_003555623.1| chr5 33290714 33296345 -
2 domain predictions
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Lj6g3v0529600.1
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Cicer arietinum] gi|502140174|ref|XP_004504092.1| chr6 5551782 5555419 +
2 domain predictions
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Lj6g3v0529600.2
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Cicer arietinum] gi|502140174|ref|XP_004504092.1| chr6 5551782 5557213 +
2 domain predictions
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Lj6g3v2218180.1
n.a. PREDICTED: monoacylglycerol lipase ABHD6-like [Glycine max] gi|356557563|ref|XP_003547085.1| chr6 25667536 25668428 -
2 domain predictions
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LotjaGi1g1v0144300.1
n.a. Alpha/beta-hydrolase superfamily protein; TAIR: AT1G78210.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; TrEMBL-Plants: tr|A0A151TZS1|A0A151TZS1_CAJCA 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; Found in the gene: LotjaGi1g1v0144300 LjG1.1_chr1 23999201 24002403 -
2 domain predictions
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LotjaGi1g1v0231900.1
n.a. Alpha/beta-hydrolase superfamily protein; TAIR: AT4G39955.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P9WNH2|Y2715_MYCTO Uncharacterized protein MT2788; TrEMBL-Plants: tr|G7J3Q3|G7J3Q3_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi1g1v0231900 LjG1.1_chr1 54465810 54475275 +
2 domain predictions
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LotjaGi1g1v0231900.2
n.a. Alpha/beta-hydrolase superfamily protein; TAIR: AT4G39955.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|P9WNH2|Y2715_MYCTO Uncharacterized protein MT2788; TrEMBL-Plants: tr|G7J3Q3|G7J3Q3_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi1g1v0231900 LjG1.1_chr1 54466032 54474869 +
2 domain predictions
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LotjaGi1g1v0371800.1
n.a. Alpha/beta-hydrolase superfamily protein; TAIR: AT5G21950.6 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9BV23|ABHD6_HUMAN Monoacylglycerol lipase ABHD6; TrEMBL-Plants: tr|G7J939|G7J939_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi1g1v0371800 LjG1.1_chr1 84998794 85001092 -
2 domain predictions
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LotjaGi1g1v0425500.1
n.a. Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT4G24160.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q0J0A4|LPAAT_ORYSJ Probable 1-acylglycerol-3-phosphate O-acyltransferase; TrEMBL-Plants: tr|I1JT54|I1JT54_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0425500 LjG1.1_chr1 91994856 92000853 -
2 domain predictions
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LotjaGi1g1v0549900.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7ZY18|G7ZY18_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi1g1v0549900 LjG1.1_chr1 108014747 108019129 -
2 domain predictions
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LotjaGi1g1v0549900.2
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7ZY18|G7ZY18_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi1g1v0549900 LjG1.1_chr1 108015606 108018748 -
2 domain predictions
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LotjaGi1g1v0650000.1
n.a. Alpha/beta-hydrolase superfamily protein; TAIR: AT5G17720.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q700D5|BDG4_ARATH Probable lysophospholipase BODYGUARD 4; TrEMBL-Plants: tr|I3SBG8|I3SBG8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0650000 LjG1.1_chr1 120858265 120860928 +
2 domain predictions
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LotjaGi1g1v0665000.2
n.a. Proline iminopeptidase; TAIR: AT2G14260.1 proline iminopeptidase; Swiss-Prot: sp|P93732|PIP_ARATH Proline iminopeptidase; TrEMBL-Plants: tr|I1ME45|I1ME45_SOYBN Proline iminopeptidase; Found in the gene: LotjaGi1g1v0665000 LjG1.1_chr1 122713155 122718246 -
2 domain predictions
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LotjaGi1g1v0763700.1
n.a. Epoxide hydrolase 2; TAIR: AT4G02340.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|I6YGS0|EPHA_MYCTU Epoxide hydrolase A; TrEMBL-Plants: tr|A0A072UF47|A0A072UF47_MEDTR Epoxide hydrolase; Found in the gene: LotjaGi1g1v0763700 LjG1.1_chr1 133644760 133648511 +
2 domain predictions
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LotjaGi1g1v0764500.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT3G62860.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|K7KGB9|K7KGB9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764500 LjG1.1_chr1 133730409 133735559 +
2 domain predictions
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LotjaGi2g1v0073600.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I1LX24|I1LX24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0073600 LjG1.1_chr2 19009016 19014080 +
2 domain predictions
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LotjaGi2g1v0206400.1
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991135 65000943 -
2 domain predictions
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LotjaGi2g1v0206400.4
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991399 65000290 -
2 domain predictions
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LotjaGi2g1v0276200.1
n.a. Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT5G19850.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9FFZ1|PPH_ARATH Pheophytinase, chloroplastic; TrEMBL-Plants: tr|G7K0K3|G7K0K3_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi2g1v0276200 LjG1.1_chr2 74798775 74803149 +
2 domain predictions
 –