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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0549900 |
| Transcript ID | LotjaGi1g1v0549900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7ZY18|G7ZY18_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi1g1v0549900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108015606..108018748) extracted from Lotus japonicus Gifu genome v1.2.
TCAACCATGAAGTTTCCAGGAATTAATAATGAGTTGCAGATGATTTTGGATGCTAAAATGGACGAAGTGTCTGCTAGAAG GCGCGCTCGTGAGGCCTTCAAGGATGTTCAGCTTGGGATTGACCATATACTGTTTAAGGTATCTAGCTTAACCTTACTGT CTCTTGATTTGTTCTTTTTCTGTGGTTCTTTTATTTTTTAGATTGTTTTGTTCTGTTCCTTCAAGTTAAATTTTGATTCT TCTGTTTCTAACAACTTAACTAAGTTGAAAGTTCATAAGCTAATATTAGAAACATCAAAATAAGCTCAGAAAGCTTATAG ATAAGTCATAAGATATGTTTATATGTATAAGCCCTGGAAGAGCTTATTTGAGCTTATTGCGTAGCGTATACACTTATAAC AGTGTTTGAGAGAGTTATGTGACCGGCTTATGACCTTCACTCATAAGTTGTTTTGAGCTTATTTTCAAAGCTGTTCAAAT TAGCTTATTAGTTTATAAATAAGAGCTTATGCTTACCTATAAGGCTATAACCTATTTTCAGCTGATTTCAATAAGATTCT TAAATTAGCTTATCAGTAAGCCCTTATGTGATGAACGTTTAAGTACTTGTGGAATAAATTTATCTTAAATAAGATCTTCT AAACGCACCATTTGTAATAAACTTGGTGACTTGTTGCTTGTTTCTCTTCAGTAGTCTTGAGGTAGTTAATTGGTTTAGTT CAGGTTAGTTGAGATGTTGTTGGGTTTGGTTATAGTTCACCCATTGTTGGTTAAAAAATTTAAAATTTGTAAAATTTACT TCCTCTGATTGTTAAGATCAATTCCTTTATGCTTTGCAGACTCCTTGCGATGGACTAAAAATGAAGGAGGTATGAAGTCT ATTTCGGCAATGATTTTTCATAAATTTTATTTATGTTTCAACTGAGGATTTACCTCAAAAAATATGGAACTTAGCTTAGT TCTACTTTGACTTGGCATCAATGTCACTTTGTCATTGTCCTGTATATGCTAATAAGTTCCCACCTCTTCTGATTTTGCTT AACTTGATGTCCTTGCAACAGTCATTTGAGGTGAACTCAAGGGGTGTAGAAATTTTCTGTAAAACTTGGCTTCCCGGGAC TGCTAGGCCAAAAGCGGCTGTGTTTTACTGTCATGGTTACGGTGACACTTGCACTTTTTTCTTTGAAGGCAAGTACTTGG CATTATGTTCTGGTTGTGGCAAGTAACTACATTAAGTCACATTGTGCACCACAAACTCAATCATATCGTGAAATTCTTTG CAGGAATAGCTAGAAAATTAGCATCGTCTGGATATGGAGTTTTCGCTATGGATTATCCAGGATTTGGTCTTTCAGAAGGT CTACATTGCTATATTCCCAGTTTCGATGGGCTTGTTGATGATGTTATTGAGCAGTACTGCAAAATCAAAGGTACATAAAC TCACATCAGCTCATGTCTTGAATGTTCACTTAACTTCGACTTCTAAGTGACATTGCTAGTTCAGTGAAAGGACTTTGAAA TTGCTTCTTTGATTTGAAACTTGTATCGTGACTTTCACATAGAAGGTGTGTTATGGGATGTATACTTCATACCTATTATA CTTTCCATTTCATGTATACAATCAAGTTCATTATTTAAATATTGTACTAAATCTACTATCTGTATTTAATCTTTGTGACT TTGTCACATTGCAAAAAAGTTGATGAAAATGGAGTTTTGGATTTAGATTCAACTATTTAGTCTTACCAAAGTTTTGGTTC GTTTCGTGGCAGAAAACCCAGAATTCCGTTCTATTCCAAGCTTCCTCTTTGGACAGTCTATGGGTGGAGCAGTTGCTTTG AAGATGCATCTTAAACAACCTAATGCCTGGGATGGTGCCATTCTTGTTGCACCTATGTGTAAAGTAAATTTTTCTACAAC AAATGCAAGTTAGGAGTTGTGGTTTGATTTTCTATAATCTCTGTTTGACCCCACACTCTATGTAGATTGCAGATGACATG GTTCCGCCAAAGTTGCTAGCGCAGATTCTCATTGGCATAGCAAATGTTCTTCCAAAGCTCAAGTTAGTTCCACAGAAGGA TTTAGCAGTGGCAGCATTTAGAGAATCAAAGAAGAGAGAAATGGTTTGTATATATCTTAAGGAAAATGCTAACATATTCT CTTTAAGGAATCAAAAATAGAAAATTTTCTCCTAAAAATTGTTGCATCTAATATTGCTAATGTATTAAATCTTATACTTT TCAATAAGAACTTCCCATTTCTTGTTCTTTAACTAGTTCCTTTTGTGAGAACTTTGACACTTTTCTGATGTCTGTATGCA GACAGCCTACAATGTTGTTGCTTACAAGGATAAACCACGGTTGAGGACTGCTGTTGAAATGCTCAAAACTACTCAAGAAA TCGAACAGAGATTGGAAGAAGTATGTTGTTCTGATCTTTTGATTTGGCTAAATATCTAAATAAAGTGCATCCTGCTAGCA ATCTCTCTTCTCTCCCTGGACCATTTCATGAGACTTTTTATGCTCATTTTTTGAATATACAAGACAAATATGAGGCTGAG AGGAGCTATAGGCTCCATCTTGTTAATAACTAATGTGATATTTTTATGATTTCTGTTAAAGTTTATTTGGCATGCCTTGA GCTTATTTTATAGCAAACGATCATGCACGTGTTTGGGTAGCTTATAAAAATAGCTTATGACATGCCTATAAACTGTTGAG TTTATTTTCGTATGCTCTTTAGATTAGCTTATGAGTAGACATATATGCCTACTATAAGTTATTTTAAGCTTATTTCAGCA AGCTTCTCAAGTTAGCCTATGAAAAAGCTCTTAATTAAGCTGTTAACACAAATTTATTCTTCAAGATTGTGATTCTTGTT AAAGTTAAGTGTAATGGCTGTGATTTCAGGTGTCTCTGCCATTGCTAATCCTTCATGGTGAGGCTGATATAGTTACTGAT CCCTCTGTGAGCAAAGCATTCTACGAGAAAGCTAGCAGTTCAGACAAGAAGCTTAAACTTTACAAGGATGCCTACCATTC TCTTCTTGAGGGTGAGCCGGATGAAGTAATAATCCAAGTTCTCAGTGACATCATTTTATGGCTTGATGAGCACAGCTTGA AACATTCTTCATCTTCCTCTTAA
CDS sequence (LotjaGi1g1v0549900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTCCAGGAATTAATAATGAGTTGCAGATGATTTTGGATGCTAAAATGGACGAAGTGTCTGCTAGAAGGCGCGC TCGTGAGGCCTTCAAGGATGTTCAGCTTGGGATTGACCATATACTGTTTAAGACTCCTTGCGATGGACTAAAAATGAAGG AGTCATTTGAGGTGAACTCAAGGGGTGTAGAAATTTTCTGTAAAACTTGGCTTCCCGGGACTGCTAGGCCAAAAGCGGCT GTGTTTTACTGTCATGGTTACGGTGACACTTGCACTTTTTTCTTTGAAGGAATAGCTAGAAAATTAGCATCGTCTGGATA TGGAGTTTTCGCTATGGATTATCCAGGATTTGGTCTTTCAGAAGGTCTACATTGCTATATTCCCAGTTTCGATGGGCTTG TTGATGATGTTATTGAGCAGTACTGCAAAATCAAAGAAAACCCAGAATTCCGTTCTATTCCAAGCTTCCTCTTTGGACAG TCTATGGGTGGAGCAGTTGCTTTGAAGATGCATCTTAAACAACCTAATGCCTGGGATGGTGCCATTCTTGTTGCACCTAT GTGTAAAATTGCAGATGACATGGTTCCGCCAAAGTTGCTAGCGCAGATTCTCATTGGCATAGCAAATGTTCTTCCAAAGC TCAAGTTAGTTCCACAGAAGGATTTAGCAGTGGCAGCATTTAGAGAATCAAAGAAGAGAGAAATGACAGCCTACAATGTT GTTGCTTACAAGGATAAACCACGGTTGAGGACTGCTGTTGAAATGCTCAAAACTACTCAAGAAATCGAACAGAGATTGGA AGAAGTGTCTCTGCCATTGCTAATCCTTCATGGTGAGGCTGATATAGTTACTGATCCCTCTGTGAGCAAAGCATTCTACG AGAAAGCTAGCAGTTCAGACAAGAAGCTTAAACTTTACAAGGATGCCTACCATTCTCTTCTTGAGGGTGAGCCGGATGAA GTAATAATCCAAGTTCTCAGTGACATCATTTTATGGCTTGATGAGCACAGCTTGAAACATTCTTCATCTTCCTCTTAA
Protein sequence (LotjaGi1g1v0549900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFPGINNELQMILDAKMDEVSARRRAREAFKDVQLGIDHILFKTPCDGLKMKESFEVNSRGVEIFCKTWLPGTARPKAA VFYCHGYGDTCTFFFEGIARKLASSGYGVFAMDYPGFGLSEGLHCYIPSFDGLVDDVIEQYCKIKENPEFRSIPSFLFGQ SMGGAVALKMHLKQPNAWDGAILVAPMCKIADDMVPPKLLAQILIGIANVLPKLKLVPQKDLAVAAFRESKKREMTAYNV VAYKDKPRLRTAVEMLKTTQEIEQRLEEVSLPLLILHGEADIVTDPSVSKAFYEKASSSDKKLKLYKDAYHSLLEGEPDE VIIQVLSDIILWLDEHSLKHSSSSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 340 | 327 | 1.2E-187 | – | |
| PANTHER | 14 | 340 | 327 | 1.2E-187 | – | |
| SUPERFAMILY | 41 | 335 | 295 | 2.35E-43 | ||
| Gene3D | 49 | 339 | 291 | 9.6E-62 | ||
| Pfam | 76 | 318 | 243 | 6.6E-62 | ||
| PRINTS | 106 | 121 | 16 | 9.6E-9 | ||
| PRINTS | 157 | 170 | 14 | 9.6E-9 | ||
| PRINTS | 273 | 287 | 15 | 9.6E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0549900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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