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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR11614
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 38 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.026s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0065229.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357443267|ref|XP_003591911.1| chr0 22669837 22671239 +
1 domain prediction
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Lj0g3v0107429.1
n.a. Monoglyceride lipase [Medicago truncatula] gi|357496923|ref|XP_003618750.1| chr0 46341291 46346480 -
1 domain prediction
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Lj0g3v0107429.2
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356545758|ref|XP_003541302.1| chr0 46341291 46346228 -
1 domain prediction
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Lj0g3v0194809.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 95023111 95027688 +
1 domain prediction
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Lj0g3v0247169.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502158479|ref|XP_004511168.1| chr0 128090570 128095147 -
1 domain prediction
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Lj1g3v1767800.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502142533|ref|XP_004505004.1| chr1 20527480 20528416 +
1 domain prediction
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Lj1g3v2082100.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356507933|ref|XP_003522717.1| chr1 24614362 24617852 +
1 domain prediction
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Lj1g3v3315210.1
n.a. PREDICTED: monoglyceride lipase-like isoform X1 [Cicer arietinum] gi|502090066|ref|XP_004489110.1| chr1 37037609 37041216 -
1 domain prediction
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Lj1g3v3315210.2
n.a. PREDICTED: monoglyceride lipase-like isoform X2 [Cicer arietinum] gi|502090069|ref|XP_004489111.1| chr1 37037609 37041216 -
1 domain prediction
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Lj1g3v4885870.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356503902|ref|XP_003520739.1| chr1 59306099 59311064 +
1 domain prediction
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Lj2g3v0636780.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502164948|ref|XP_004513342.1| chr2 10320396 10324582 +
1 domain prediction
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Lj2g3v0726320.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356531204|ref|XP_003534168.1| chr2 11495581 11498441 -
1 domain prediction
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Lj4g3v0450250.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502142533|ref|XP_004505004.1| chr4 6199169 6200782 -
1 domain prediction
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Lj4g3v2139340.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356548571|ref|XP_003542674.1| chr4 29428018 29428188 +
1 domain prediction
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Lj5g3v2183870.1
n.a. PREDICTED: monoglyceride lipase-like [Cicer arietinum] gi|502120794|ref|XP_004497084.1| chr5 31744287 31747466 +
1 domain prediction
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Lj5g3v2288610.1
n.a. PREDICTED: monoglyceride lipase-like [Glycine max] gi|356574985|ref|XP_003555623.1| chr5 33290714 33296345 -
1 domain prediction
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LotjaGi1g1v0406900.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G11650.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I1JUW8|I1JUW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0406900 LjG1.1_chr1 89589457 89594048 +
1 domain prediction
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LotjaGi1g1v0406900.2
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G11650.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I1JUW8|I1JUW8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0406900 LjG1.1_chr1 89589887 89593575 +
1 domain prediction
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LotjaGi1g1v0406900.3
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G11650.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|V7AVB8|V7AVB8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0406900 LjG1.1_chr1 89589887 89593575 +
1 domain prediction
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LotjaGi1g1v0549900.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7ZY18|G7ZY18_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi1g1v0549900 LjG1.1_chr1 108014747 108019129 -
1 domain prediction
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LotjaGi1g1v0549900.2
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7ZY18|G7ZY18_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi1g1v0549900 LjG1.1_chr1 108015606 108018748 -
1 domain prediction
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LotjaGi1g1v0764500.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT3G62860.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|K7KGB9|K7KGB9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0764500 LjG1.1_chr1 133730409 133735559 +
1 domain prediction
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LotjaGi2g1v0073600.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.2 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I1LX24|I1LX24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0073600 LjG1.1_chr2 19009016 19014080 +
1 domain prediction
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LotjaGi2g1v0190900.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G73480.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|A0A072UCF9|A0A072UCF9_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi2g1v0190900 LjG1.1_chr2 62231926 62236198 +
1 domain prediction
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LotjaGi2g1v0206400.1
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991135 65000943 -
1 domain prediction
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LotjaGi2g1v0206400.3
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991399 64999504 -
1 domain prediction
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LotjaGi2g1v0206400.4
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991399 65000290 -
1 domain prediction
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LotjaGi2g1v0206400.5
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G16120.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|G7KN38|G7KN38_MEDTR Monoglyceride lipase; Found in the gene: LotjaGi2g1v0206400 LjG1.1_chr2 64991399 65000448 -
1 domain prediction
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LotjaGi2g1v0276900.1
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT1G77420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I3S4T0|I3S4T0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0276900 LjG1.1_chr2 74854871 74859590 -
1 domain prediction
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LotjaGi2g1v0276900.2
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT1G77420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I3S4T0|I3S4T0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0276900 LjG1.1_chr2 74855251 74858663 -
1 domain prediction
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LotjaGi4g1v0052300.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G11090.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I3S4R2|I3S4R2_MEDTR Alpha/beta hydrolase family protein; Found in the gene: LotjaGi4g1v0052300 LjG1.1_chr4 6317931 6319812 -
1 domain prediction
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LotjaGi4g1v0306700.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT1G52760.1 lysophospholipase 2; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|A0A0R4J4M5|A0A0R4J4M5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0306700 LjG1.1_chr4 68214089 68215184 +
1 domain prediction
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LotjaGi5g1v0250600_LC.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT2G47630.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|A0A1J7I255|A0A1J7I255_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0250600_LC LjG1.1_chr5 55896779 55902492 +
1 domain prediction
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LotjaGi5g1v0275000.1
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT5G19290.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|A0A0S3SNV0|A0A0S3SNV0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0275000 LjG1.1_chr5 58875763 58876740 +
1 domain prediction
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LotjaGi5g1v0339500.1
n.a. Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT1G77420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I3SV49|I3SV49_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0339500 LjG1.1_chr5 65651360 65655301 +
1 domain prediction
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LotjaGi5g1v0339500.2
n.a. Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT1G77420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I3SV49|I3SV49_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0339500 LjG1.1_chr5 65651508 65655163 +
1 domain prediction
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LotjaGi5g1v0339500.3
n.a. alpha/beta-Hydrolases superfamily protein; TAIR: AT1G77420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|I1NFJ8|I1NFJ8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0339500 LjG1.1_chr5 65651614 65654960 +
1 domain prediction
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LotjaGi5g1v0358300.1
n.a. Alpha/beta-Hydrolases superfamily protein; TAIR: AT2G39420.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q9C942|CSE_ARATH Caffeoylshikimate esterase; TrEMBL-Plants: tr|A0A072VS52|A0A072VS52_MEDTR Alpha/beta fold hydrolase; Found in the gene: LotjaGi5g1v0358300 LjG1.1_chr5 67285909 67297105 -
1 domain prediction
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