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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR28242:SF7
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.013s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0166019.1
n.a. PREDICTED: histidine-containing phosphotransfer protein 1-like [Vitis vinifera] gi|225436283|ref|XP_002265254.1| chr0 78898754 78899927 -
1 domain prediction
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Lj3g3v1145880.4
n.a. PREDICTED: histidine-containing phosphotransfer protein 1-like [Vitis vinifera] gi|225436283|ref|XP_002265254.1| chr3 15484795 15492721 +
1 domain prediction
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Lj3g3v1145890.1
n.a. PREDICTED: histidine-containing phosphotransfer protein 1-like [Vitis vinifera] gi|225436283|ref|XP_002265254.1| chr3 15493576 15502556 +
1 domain prediction
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Lj3g3v1145890.2
n.a. PREDICTED: histidine-containing phosphotransfer protein 1-like [Vitis vinifera] gi|225436283|ref|XP_002265254.1| chr3 15495683 15506874 +
1 domain prediction
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LotjaGi3g1v0072600.1
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.2 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0072600 LjG1.1_chr3 7914328 7924987 -
1 domain prediction
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LotjaGi3g1v0072600.2
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT5G39340.1 histidine-containing phosphotransmitter 3; Swiss-Prot: sp|Q6VAK3|OHP1_ORYSJ Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|A0A0B2QIZ1|A0A0B2QIZ1_GLYSO Histidine-containing phosphotransfer protein 1; Found in the gene: LotjaGi3g1v0072600 LjG1.1_chr3 7914328 7924987 -
1 domain prediction
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LotjaGi3g1v0175000.1
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 LjG1.1_chr3 24292935 24307710 -
1 domain prediction
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LotjaGi3g1v0175000.2
n.a. Histidine containing phosphotransfer protein, putative; TAIR: AT3G21510.1 histidine-containing phosphotransmitter 1; Swiss-Prot: sp|Q9ZNV9|AHP1_ARATH Histidine-containing phosphotransfer protein 1; TrEMBL-Plants: tr|V7BVT0|V7BVT0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0175000 LjG1.1_chr3 24293018 24307804 -
1 domain prediction
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