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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PTHR31060:SF5
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.014s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1828490.1
n.a. PREDICTED: BTB/POZ domain-containing protein At3g50780-like [Glycine max] gi|356496818|ref|XP_003517262.1| chr2 27473150 27477070 -
1 domain prediction
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Lj4g3v0901360.1
n.a. PREDICTED: BTB/POZ domain-containing protein At3g50780-like isoform X1 [Cicer arietinum] gi|502153123|ref|XP_004509225.1| chr4 13460424 13463976 +
1 domain prediction
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LotjaGi2g1v0395700.3
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|V7CHN2|V7CHN2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700 LjG1.1_chr2 89317847 89320910 -
1 domain prediction
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LotjaGi4g1v0113900.1
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16427027 16431578 +
1 domain prediction
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LotjaGi4g1v0113900.2
n.a. BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|A0A072TUF3|A0A072TUF3_MEDTR BTB/POZ domain plant protein; Found in the gene: LotjaGi4g1v0113900 LjG1.1_chr4 16428000 16430996 +
1 domain prediction
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