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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0395700 |
| Transcript ID | LotjaGi2g1v0395700.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G50780.1 BTB/POZ domain protein; Swiss-Prot: sp|Q9SVM0|Y3078_ARATH BTB/POZ domain-containing protein At3g50780; TrEMBL-Plants: tr|V7CHN2|V7CHN2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:89317847..89320910) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGAAATTAGGCCTACCCGGGTGGAGCAAGATCAAACCAAGATCAGAAGTGTTCCAATTGCTGTAACCCCTGAAGG ATTTTGGTGTTGCCCTTCCCCTGCAGTGTTTCAGAAAACCCTGAAGACTCAAAGTCCTCTGAATAAGCCTAAACCCTCTT CACCAAATCCAAACACTAGTGCTCAGAAAAGAGAAGTTTCAGTGAGTGATGAGAGAAGAACAGTACCTGCCCCATCAAGG ATGGTGGATTCAGATGCTCAACAATGTTCTGTGGCTGCAGAGAGAGCTGTTCCCAAACCCAAAACTGAAAAAACTCTGCC CAAAAAGGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTCTAACCGGAAAGCAGGGGTTTTGTG TGAAGTTGAGCTTGCACAGGGATGTTCTAACAGAGAAGAGTAGTTTCTTTGCTGAGAAATTCTATGAGGATTGTGGTTTG TCATTTCTCCGAGTTGATGATTGTGAGGATGTTGAAATGTTTGTTGAAACGGTTGGGCTTATGTACTGCAGAGAAATGAA ACAGCGGCTCATGAAGCAAACGGTTTCTCGCATCCTCCGAATACTCAAGGTAATTTGCTTTCTGTCATGTTTTGATGTTT ACTATCTACTTTGATGGTATTGCCTGAATTGAATTTTGTTGTATAAGGCATTTTGAGGAAGTGATATGTGGTTTATTATT GCTCTTTTATTCTTACTGATAGTATACTTTTCTGATTATTTTTGTGGTGCATGTTGATTTGTTTGGCTGAAAAGTTCCAT TTGATTCCTATATTAATATATCCACTAAGGAATGTTAGGAGTCTTAATTTCATATTAAGTTAGTAATGGGAGAGTTTACA ATTTAGATTCATAATGCTGCTACCAACTGCATTTTATCTGTCATGGAATAGATATAAATATAAACTCAATGAAAGATATT TTTACTGCTTTGTGACAATCTAAACTAGCATGCCAACATCATGATTATCTGATAATTTGGAGCTGCTGTTATGCAATGAA AACCAGTGCATTACAGTTAATTCAAGGGGCTGATAGTTAAAGGATTGGACCTGAATTAAAGATCATTGTAATGGTGTTAG TTAGTTAAATAGTTTGACAGTTGTTACTATCAATTAGTTAACTGTTAGTAGTTTGTTACATTTCGTATAATAGATTGAAG AGCAGATAAAAGGGCTTCATTTAAGAAATTGGACCAGTTTTGGGAGAGATTAGTGTCTCCAATACTAGAGTATGTTGTCA ATCATTTTCTTCTTCAAGAAGAGAAATCCATCTCTTAGTTCGGTTCTTCTATTTCCTTTTCTATCTGATCCAGTTTCTTT CAAATGCGTTATAAATGTGAATTTCCATGATGATAATAATATAAGCATGGTGTTACATACTTACATGGGTTTTTTTCGTT TCTCCTTGGAAAATAGTTTAAATTATATATTGATCTGATTTGGATTTTGAGGTGATCTTGAGCTAACATTGATGGATAGT GAGGTTTGCTATGATGGTGCTCATAGAAGAAAGAGTGATAGTAATAACTCAAGGGATCATACTAGTGTACCTAGTGGTGA GGGTGACCTCATTTATATAACACAATAGCTGTCTAAGAATACAAGATTCAGTCGCCTTGATACTTGGAATAGGTGATCTA TAGATTATATTTGGATATGGTTTTATGCAGAGGCGTAAGATCCGCGATCTGATGTCTCTACGATTTCTCAAGGATACAAG AGTGTAATAATATCCGAGATATTCAAGATTGTCATAGATCTGGGTTATGGCAAAAAATGACATGCAAAGGGTTATTAGGC CTGGATCTGGGCTGCGTATTAGAACTCAGCATAATTTCATCCTTATAACCGGTTTCCTGCGAGAGCATAGTATTTATTAT CTGCATAGTTTGAAGTTAGCTGGGTGAAACTTTTTATGATTCTGCATTTTCTGCATATCTATAGTTGTCAGTTTGTATTA ATCATGTATAATAATTTCTTGTAGTTACTATTGGGGGAGTATATGTTAGGACTTTATAGTTCTTTTGAACACTTGATAGA AACTATTTTGCAGGTTGCAGAATTCCTTGGCTTCAGCTTATGCATCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCCT GGGTTGGAAAAGAAGAAGAAAAGGTGGTGTCAACTGTACTAAGACTCCAACGAGAAGGAACCGGGGTCAATCCCGTGCTG AAACGTGTTTCTTTTGATGCTTCTAATGGCCCAAAAGACACTCTATCCCATATTCTTGAGCTTGTTCTCAAAAGCAATGA GGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCCTCAGAGAGAATAACAGATTTCCATGCCCTGCGGGTT CAGATGACATCTGTAACAATGACATGATTTATAGGTCATGCAGAAGCTGCTTGGATTCTCTATTATCTCTGTTCAACCAG GCTGCAGAACTAGGCTTTGCAGACACACCTAGTGATAACAGAGAACCTGTAGTGAAACATATAGCTCTTGAAGCTGATAA CTTGTTATGGTTGCTTGAGATTTTATCCGACAAACAAGCCGCGGATGAGTTTGCCCTGATGTGGGCAAACCAGCAGGAAT TGGCTGCTCTACATGGAAAGCTGCCTATCGTATTTCGTTATCACGTCAGCTGCATTTCAGGAAGACTATATGTCGGAATT GGAAGAGGGGAGTTATTACCGTTGAAAAACACGCGCCGGCTGCTGTTACAGACATGGCTGCAACCTCTGATCAACGACTA CAACTGGTTGCAGCATGGATGCCGGTCATTTGATTGGAAACTTGTGGAGGAAGGAATCGGAAGGACGATTCTCACCTTGC CTTTGGAAGAACAACAAAATATTTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAAGTGGTGATGGATGTCCCAATCTTCAA AGAGCTTTTGAGGTTTGGTGGCGGAGAACTTTCATTAAACCATATGTGGAAGGACAAGGTAATGCTATGCCAAATAGTTA ACTGAATGTTGTCAAAGCAGCATG
CDS sequence (LotjaGi2g1v0395700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAAATTAGGCCTACCCGGGTGGAGCAAGATCAAACCAAGATCAGAAGTGTTCCAATTGCTGTAACCCCTGAAGG ATTTTGGTGTTGCCCTTCCCCTGCAGTGTTTCAGAAAACCCTGAAGACTCAAAGTCCTCTGAATAAGCCTAAACCCTCTT CACCAAATCCAAACACTAGTGCTCAGAAAAGAGAAGTTTCAGTGAGTGATGAGAGAAGAACAGTACCTGCCCCATCAAGG ATGGTGGATTCAGATGCTCAACAATGTTCTGTGGCTGCAGAGAGAGCTGTTCCCAAACCCAAAACTGAAAAAACTCTGCC CAAAAAGGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTCTAACCGGAAAGCAGGGGTTTTGTG TGAAGTTGAGCTTGCACAGGGATGTTCTAACAGAGAAGAGTAGTTTCTTTGCTGAGAAATTCTATGAGGATTGTGGTTTG TCATTTCTCCGAGTTGATGATTGTGAGGATGTTGAAATGTTTGTTGAAACGGTTGGGCTTATGTACTGCAGAGAAATGAA ACAGCGGCTCATGAAGCAAACGGTTTCTCGCATCCTCCGAATACTCAAGGTTGCAGAATTCCTTGGCTTCAGCTTATGCA TCCAATCATGTTTGGAGTACTTGGAGGCAGTCCCCTGGGTTGGAAAAGAAGAAGAAAAGGTGGTGTCAACTGTACTAAGA CTCCAACGAGAAGGAACCGGGGTCAATCCCGTGCTGAAACGTGTTTCTTTTGATGCTTCTAATGGCCCAAAAGACACTCT ATCCCATATTCTTGAGCTTGTTCTCAAAAGCAATGAGGAGAGAGGTCGCCGAGAGATGAAATCCATAGTTCTAAAGCTCC TCAGAGAGAATAACAGATTTCCATGCCCTGCGGGTTCAGATGACATCTGTAACAATGACATGATTTATAGGTCATGCAGA AGCTGCTTGGATTCTCTATTATCTCTGTTCAACCAGGCTGCAGAACTAGGCTTTGCAGACACACCTAGTGATAACAGAGA ACCTGTAGTGAAACATATAGCTCTTGAAGCTGATAACTTGTTATGGTTGCTTGAGATTTTATCCGACAAACAAGCCGCGG ATGAGTTTGCCCTGATGTGGGCAAACCAGCAGGAATTGGCTGCTCTACATGGAAAGCTGCCTATCGTATTTCGTTATCAC GTCAGCTGCATTTCAGGAAGACTATATGTCGGAATTGGAAGAGGGGAGTTATTACCGTTGAAAAACACGCGCCGGCTGCT GTTACAGACATGGCTGCAACCTCTGATCAACGACTACAACTGGTTGCAGCATGGATGCCGGTCATTTGATTGGAAACTTG TGGAGGAAGGAATCGGAAGGACGATTCTCACCTTGCCTTTGGAAGAACAACAAAATATTTTGCTTTCTTGGGTTGGAAGT TTCTTGAAAAGTGGTGATGGATGTCCCAATCTTCAAAGAGCTTTTGAGGTTTGGTGGCGGAGAACTTTCATTAAACCATA TGTGGAAGGACAAGGTAATGCTATGCCAAATAGTTAA
Protein sequence (LotjaGi2g1v0395700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEIRPTRVEQDQTKIRSVPIAVTPEGFWCCPSPAVFQKTLKTQSPLNKPKPSSPNPNTSAQKREVSVSDERRTVPAPSR MVDSDAQQCSVAAERAVPKPKTEKTLPKKVAIEFGEPGTCDMKVVLTGKQGFCVKLSLHRDVLTEKSSFFAEKFYEDCGL SFLRVDDCEDVEMFVETVGLMYCREMKQRLMKQTVSRILRILKVAEFLGFSLCIQSCLEYLEAVPWVGKEEEKVVSTVLR LQREGTGVNPVLKRVSFDASNGPKDTLSHILELVLKSNEERGRREMKSIVLKLLRENNRFPCPAGSDDICNNDMIYRSCR SCLDSLLSLFNQAAELGFADTPSDNREPVVKHIALEADNLLWLLEILSDKQAADEFALMWANQQELAALHGKLPIVFRYH VSCISGRLYVGIGRGELLPLKNTRRLLLQTWLQPLINDYNWLQHGCRSFDWKLVEEGIGRTILTLPLEEQQNILLSWVGS FLKSGDGCPNLQRAFEVWWRRTFIKPYVEGQGNAMPNS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 514 | 514 | 2.5E-250 | – | |
| PANTHER | 1 | 514 | 514 | 2.5E-250 | ||
| MobiDBLite | 43 | 84 | 42 | - | – | |
| MobiDBLite | 43 | 64 | 22 | - | – | |
| SUPERFAMILY | 116 | 221 | 106 | 2.35E-5 | ||
| ProSiteProfiles | 120 | 190 | 71 | 8.689 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0395700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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