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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0722800 |
| Transcript ID | LotjaGi1g1v0722800.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleolar gar2-like protein; TAIR: AT2G42320.1 nucleolar protein gar2-like protein; Swiss-Prot: sp|P54696|MYOH_DICDI Myosin-H heavy chain; TrEMBL-Plants: tr|A0A0B2PDG6|A0A0B2PDG6_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0722800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:129416864..129423074) extracted from Lotus japonicus Gifu genome v1.2.
ATCAACACCGGCCATACCCGGTCACCTTCCTGCACCGACACCCCATCCCCCGGTCACCCTCCTGTTTTCCACGTTCCCGC ACTCTCTTCTCTTCTCCCAACAATCACACAGACAGAGACACAACATTGTTGCAGCAACGTTTCTAATCCCAAGAACCTCT TCACTTCACTCTCTCTCTCTCTACCCGTGTTCTGTGTGGTAAGTTCCAACGTTTCTTCTTCTTTTTCCTTTATTGTTACG GTTACAGCTTTTTATCTTCTTCTTCCTTTTTCTCATACTCAACAATCTTGCATGCCTTTACACCATTCTTCTCTGCTAGA TCTTCTTCCTTTACCATTTACTAGTCTACTACTTTCTCCCAATTTCCCTTCTCTGTCCTTGTTTTTGTTTTTTCTGTATA CCATTTGATCATGACGGTTCATAGATTCATCTTCTTCACACTTCGGTTGTACTTGGCATTTGCATTCTTCTTGTAACTGC ATAGTGACATGAAATGGATTGTATGTAGTTCATTGATTACCAGAGCAGAGCATTCACTTCCAAAATATCCCAATTTAGTA ATTTCACCCTTTTCCTTCATGGATTATGTTGGTCATTTTAATTGTTAAAAAATTTTAAAAGATTAAATTTTTCGACAGGT TAGCAATAGTTGTCAAATGGGGTCTTCAAATTATTATTACAATATATATAGCCAGCTTGCATATTTGATTTGATGATTGT GACGCTCATGGAGGATTTTTTTTTTCTTTTCTTCACTCTCTACTTCAAGCTCTCTGTTTTCTTTGTTTTTATCCCTTTTT CTATGGCCAAATAATTCTAGTTTTATTTTTTTTTTTATCAGAAATGGACAATGGTAACCGCATCTTGTGCGTTTGGCTAT TCTTCTTTTATGTAAAGAATATATTTTTCATCGTATTCTATGTCCTTGTCTGAATATTGCACACCTTGCTCCTTCATAGA GCAAAACAAACAAGTTATAATATGTTTGCTCAATGTAGGAACTTGCTTCAATTTCACTAGTGTGAAACAAGATTGCAATT TATTCCCAATTGGGTATCTAGTAGCTCGGACTCTTGTATCAGTGCCTATATGATCTTAATTTGATTTCTGCTTCCCTCTA CCTGCTGAGTTATTACTTTCTAAATGAGGTTTTGATTCATTTGGTGCATTTTTTTGTATTTATTACTACTAATTGTGTGC TCTGAGATCTTTCTGAACTTGTTATCTTTATGGTTTTTCTATATTGGACTTGTGCTGCGTCTCCTGGTACATGTTGTGTT GATGAATTTTAAATGCCTCAACTTTAAATCCCATCTCTTTAATCTTTATTGGTTTCCCTTTTCTAGTTTTTGGCTAGTTT TTTCCTTATTTTTAGAATTTTATAACTTATTTTATCACTACTTTTGCAGGTAGGACATGGTTGTTTTCAATCTGTGGAAA AACTGTTATGGTATTGGTAGTGGACTTTAGGAACTGAGAACTGCTTTGCCACGAAGGAGCTCGCTAAGGTTAGTGAAAGC TATCATTTTCCTGTTACAGCTTCTTGATTTGATTGAAATTTGAGGGAATTTGTAAGCATGAAAGAAACTGAGAAGAGAAA AGCTTCAAGGAATAGTCAGACAAAGGGTTCTAGAAGAACCGAAAGAAGAGAGGATAAATTGCATCAAGATAATTCATCCA AAACATTGAATGAAAAAGGAACTGAATCTAAGACACCCCAGGATAGATCAGCTGCAAATAATTTAGTAGGCGATTCAAAC ACTGCCTCAGAGAATTCAGAAACTTATGAAAACGTGGTTATAGATTATGTGGATGATGTCAACAGGTCTGAGGAGGCACT TGCCGAGATGAAAGTTAATGCAATGGTTGCTAACCAGGCCAGTGATACGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAG TATCAGATACTGATACAGTAAAGGATTCAGTGTCATCCCAAGGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAAAAA GCTTCAAAAGATGCAAAAAGTAAGGTCAAAGTGAGTCCCTCAGAAAGCAGTCGTGGATTAAAGGAGAGATCTGATAGGAA AACAAACAAATTGCAATCCAAGGTATCAGATAGCAATCAAAAGAAACCCATGAACTCAACTAAAGGACCTTCCAGAGTTA CAAACAAGAATACTTCGTCAAACAATTCTAAGCCTGTGAAAGCTCCTGTAAAAGCTTCTTCAGAATCTTCTGAAGGAGTT GATGAAAACCATGTTCTAGAGGTGAAGGAAATCGAGATCCTGGATGGAGCCTCCAATGGTGCTCAGAGCTTAGGAAGTGA AGATGAAAGACATGAGACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGCTGCTTTGGAACTAAAAATAGAAG AAATGGAATTACGAGTTGAAAAGCTTGAAGAGGAACTAAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTGTAGTA CCAGAGCATGGGAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATTTACATGCGTCTAAGCA TTGGACCCAAAATAGGCGAGCAACAATAGCCAAGAATACTGTTTCTGGCCTTATATTGGTTGCAAAGTCTTGTGGTAATG ATGTTTCAAGGTATGTACTTGAATTTATTAAAAAAAAATTCATCTGCAGATTTTGATTTCTAGACAACAGATATTCTAAT CTTTGTTTGTATTTTAGGTTAACATTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTCACATGCTTTTGGCAA TTCATGTCAAGTTAGTCCCCTTATGCGGTTGGCTGAATCGAATGGGGCTGGCAATGGAAAGTCTGCATCCCTGAAATGGA AAGGATTCCCAAATGGTAAAGCAGGAAGTGGTTTCACTCAGTTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACATCT GCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTGGAGTCAGTGTGGTGGCAGGTATAAATGTTTGTCTCGTG TCTAAGTTGTTGTTTATAATTAAGACATGGAGGCTTTCACTGATGTAAGAAAACAACAATTGAGAGCAGTACATTGTGTA TTCCAATCTATGCTTCATCTAGTTATTCAGTTTGATTGAGTAGGAAATAATCATTCTTTCTTATTGTCGTTAAATATCTT ACATTTTAAGTAACCAGTGTTTGCTATTATGGTTAGAGATAGGCTCATTCATTTTGTGATTAAATATATGCGAACATGCC GCTCCTTTCTAACATCACCGTTATTGACTAGTGTCATTAATAGTATTTATTTATTACTTGTAAAATTGGATACACTAAAT AAGAAGTGATTGATCTATTTTATGATGCTCTTGACACAGTTGATCTTGGTCTCAATTTTTTGAAGCATTAATGATAAATT GAGAAGCATGCTATGTTTTCAGGCTTTGACTCCTTACATGCAGTCTCCAGCTGGGGACTTCTCTTCAAATAAATCCTTTG GGAGGGTGCTGGGACCTGCACTTGGAGATCATAATCAAGGAAACTTTTCCATCAATCTCTGGAGATATGCTTTCGAAGAT GCTTTTCAAAGACTCTGTCCTCTTCGAGCTGGAGGGCATGAGTGTGGTTGTTTGCCTGTGTTGGCTAGAATGGTATGCTT TTTTTATTACTCCTTAGGTTCTTTAAAATGTTCACTTTCCCTCCTTTGCAGGATTGAATAGATTTAAACTCTTTCACCAG GTCATGGAACAGTGCATAGCTAGACTAGATGTTGCCATGTTCAATGCTATTCTTCGGGAGTCAGCCCTTGAGATCCCAAC TGATCCTATATCAGATCCTATATTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGCTTTGGATCTGGTGCAC AGCTAAAGAATTCTGTATGTATTTTTTTCTTATTACAGCTTTGTGTTCATACTTCACACATTGTCTAAAAATTGAGTTTG AACATTTGAATTTCTAAGCTGGCAGGGGGGAACTTTCCTCTTCTGTAGTGCATCAGTTTCTTGGGGGGACAACTTGTTGA TGGGGGCTTATAGTGTGTTTTATTTTTTATTTTTTATTTTTATTAAATAGTAAGATAAACAAATTGATTTTGTCTGCTGA GACCTGCTTGAGTTGAAAGTTGAAACTTAATCTTCTAGGTATCGAAGCATTACTCTGAGGTTAACCATGGGTTATTCAAT AATTCTATCATCTGACATTATTGTTTACAGAACATATTATAGTGAATATAAGAAAATCCGTGTCTCATATCCACTGCTTT AGTTTATCTGTTCAACCACTCTAACTTGCATTAACTGGTTACTTTTTAGTGTTTTCTTTCTGAGGAGAAAAAAGCATGGT GAATATTTGGTGTCCTGGGCCCTCCTATATTCGAACCTCATAAATTCTCAATAGATCATCTTCTCAGAAGATATCATGCT GTATGCCATTTGTGATTTTATACAGTGAACTCTTCAATTACTTGTTAGTCTCAATGCTTAGCAATGTCAGAGCGGCTAAA AGTGGTGAAATTGAAAAAAAAATTGATTTATCAAAAAATGGTGTTTATATCTTGTACTTGATGTGAGTCATGTGACTCTT ATGCAGTGCTAAGGTGTCATCACATACATAAGTTATGCCAAAAGGTGTTTATGCTTACGGAAGAGCTACTTGAATTGCAG GTTGGGAATTGGTCTAGGTGGCTTACTGATATGTTTGGCATGGATGTCGAAGATTGTGTGCAAGAATATCAGGACAGCGG TGAGAATGATGAAAGGCAAGGTGGAGATGGCGAACCTAAACCTTTTGTTCTCTTAAACGACTTGAGCGACCTTCTAATGC TCCCAAAAGACATGCTTATAGATAGACACGTCAGAGAGGAGGTTAATTTCATGAATTATATGGTGTTTTCTACTGTAGCA TATCACTTTCTCTTTTCATTGTTTTGTCACTGCATTTATTCCATATCTTTTTTTGTTGTGCAGGTATGTCCATCCATCAC TCTTTCATTGATAATTAGGGTCCTCTGCAACTTCACCCCGGATGAGTTCTGTCCAGATCCTGTTCCAGGAACTGTCTTGG AGGCCCTGAACGCGGAGGTATACTCCACATCTCTTGCATTTTTTCAGCTGTTCATGAGACTACATAAACTTGCTGCTATA TTTACAGTATGTTAGGATCACTTCATTTTTCCTCAACCATTTTTGGCATGTAGGAATGAAATGTAGAAGGGTTTCCAGAC ATGCTATTAGCAGCTTATGATAAGTCTGGGAATTTGTCTGAAAATTTTAATTAAACATTCAATTTTATGTTTATATGGTA TGTTATGATTTATGAACACCTACCTGGTTATTAAATTTTGGTTTCTCTCAACATGCATGACTTTAATAACCAATTTGCAT TGGCAAGGGAAGGAGAAATAATTTATTTAAATTCTGACATTGATAATGCCATTAACGCAATGTCAATTTCGTGTATAGAG TACATATTTTGCAACTTCCTGTTCTACACAATAGTTGACCTCTGCTATTAAAGTGAAAACTAGTTTATTGAATTTTACTT ATTTTCAACTATAGACTATTGCGGAACGAAGATTGTCAGCAGAATCTGTCAGAAGCTTCCCTTATGCCGCCGCCGCAGTT GTGTATGTGCCTCCTTCCTCATCTAATGTGGCAGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACCTGGCAAGGAATGT ATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATCCATCATTGATA AGCTTCCTTTATCTCCAACTGTCTCTGCTAATGGACAAGATAATCAAAAAGAGCACAAGAGCTATACCACCACTACAAAT GCTAGATATCAACTCCTCCGTGAAGTTTGGTCCATGTGAACCTTGAGAGTTCCCAATATGTGTACCCCAGTTTTTGTTTT TTACCAAAGGAAAATTGAATATGTAAAATATGTAGGAACAATGGAAGTAAAGTAAAAAAAGAATTTGAATAATAATAATA TCTGCATCCTGTAGTTAAGTGAGCATGTTCTGTGTACATGAGTTGCTAGGAGTTAGCTATAGAGCTTAAATGCATGAAAA CACTAGAACATTCTCCATATTAGTCTAGAAATTTTAGAAAAGAAAGTAGTG
CDS sequence (LotjaGi1g1v0722800.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAGTTAATGCAATGGTTGCTAACCAGGCCAGTGATACGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAGTATCAGA TACTGATACAGTAAAGGATTCAGTGTCATCCCAAGGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAAAAAGCTTCAA AAGATGCAAAAAGTAAGGTCAAAGTGAGTCCCTCAGAAAGCAGTCGTGGATTAAAGGAGAGATCTGATAGGAAAACAAAC AAATTGCAATCCAAGGTATCAGATAGCAATCAAAAGAAACCCATGAACTCAACTAAAGGACCTTCCAGAGTTACAAACAA GAATACTTCGTCAAACAATTCTAAGCCTGTGAAAGCTCCTGTAAAAGCTTCTTCAGAATCTTCTGAAGGAGTTGATGAAA ACCATGTTCTAGAGGTGAAGGAAATCGAGATCCTGGATGGAGCCTCCAATGGTGCTCAGAGCTTAGGAAGTGAAGATGAA AGACATGAGACAGTTAATGCTGAAGAAAATGGTGAACATGAGGACAAGGCTGCTTTGGAACTAAAAATAGAAGAAATGGA ATTACGAGTTGAAAAGCTTGAAGAGGAACTAAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTGTAGTACCAGAGC ATGGGAGCTCAGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATTTACATGCGTCTAAGCATTGGACC CAAAATAGGCGAGCAACAATAGCCAAGAATACTGTTTCTGGCCTTATATTGGTTGCAAAGTCTTGTGGTAATGATGTTTC AAGGTTAACATTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTCACATGCTTTTGGCAATTCATGTCAAGTTA GTCCCCTTATGCGGTTGGCTGAATCGAATGGGGCTGGCAATGGAAAGTCTGCATCCCTGAAATGGAAAGGATTCCCAAAT GGTAAAGCAGGAAGTGGTTTCACTCAGTTTGTTGAAGATTGGCAAGAGACAGGAACCTTTACATCTGCCTTAGAAAGAGT AGAATCATGGATCTTTTCTCGGCTAGTGGAGTCAGTGTGGTGGCAGGCTTTGACTCCTTACATGCAGTCTCCAGCTGGGG ACTTCTCTTCAAATAAATCCTTTGGGAGGGTGCTGGGACCTGCACTTGGAGATCATAATCAAGGAAACTTTTCCATCAAT CTCTGGAGATATGCTTTCGAAGATGCTTTTCAAAGACTCTGTCCTCTTCGAGCTGGAGGGCATGAGTGTGGTTGTTTGCC TGTGTTGGCTAGAATGGTCATGGAACAGTGCATAGCTAGACTAGATGTTGCCATGTTCAATGCTATTCTTCGGGAGTCAG CCCTTGAGATCCCAACTGATCCTATATCAGATCCTATATTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAGATTTAAGC TTTGGATCTGGTGCACAGCTAAAGAATTCTGTTGGGAATTGGTCTAGGTGGCTTACTGATATGTTTGGCATGGATGTCGA AGATTGTGTGCAAGAATATCAGGACAGCGGTGAGAATGATGAAAGGCAAGGTGGAGATGGCGAACCTAAACCTTTTGTTC TCTTAAACGACTTGAGCGACCTTCTAATGCTCCCAAAAGACATGCTTATAGATAGACACGTCAGAGAGGAGGTATGTCCA TCCATCACTCTTTCATTGATAATTAGGGTCCTCTGCAACTTCACCCCGGATGAGTTCTGTCCAGATCCTGTTCCAGGAAC TGTCTTGGAGGCCCTGAACGCGGAGACTATTGCGGAACGAAGATTGTCAGCAGAATCTGTCAGAAGCTTCCCTTATGCCG CCGCCGCAGTTGTGTATGTGCCTCCTTCCTCATCTAATGTGGCAGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACCTG GCAAGGAATGTATCAGCTGTTCAGAGGAGAGGATATACCAGTGATGAAGAACTGGAGGAACTTGATTCCCCTCTTACATC CATCATTGATAAGCTTCCTTTATCTCCAACTGTCTCTGCTAATGGACAAGATAATCAAAAAGAGCACAAGAGCTATACCA CCACTACAAATGCTAGATATCAACTCCTCCGTGAAGTTTGGTCCATGTGA
Protein sequence (LotjaGi1g1v0722800.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKVNAMVANQASDTEKEQKEGNGEVSDTDTVKDSVSSQGDSFTNEDEKVEKASKDAKSKVKVSPSESSRGLKERSDRKTN KLQSKVSDSNQKKPMNSTKGPSRVTNKNTSSNNSKPVKAPVKASSESSEGVDENHVLEVKEIEILDGASNGAQSLGSEDE RHETVNAEENGEHEDKAALELKIEEMELRVEKLEEELREVAALEVSLYSVVPEHGSSAHKVHTPARRLSRLYLHASKHWT QNRRATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIISHAFGNSCQVSPLMRLAESNGAGNGKSASLKWKGFPN GKAGSGFTQFVEDWQETGTFTSALERVESWIFSRLVESVWWQALTPYMQSPAGDFSSNKSFGRVLGPALGDHNQGNFSIN LWRYAFEDAFQRLCPLRAGGHECGCLPVLARMVMEQCIARLDVAMFNAILRESALEIPTDPISDPILDSKVLPIPAGDLS FGSGAQLKNSVGNWSRWLTDMFGMDVEDCVQEYQDSGENDERQGGDGEPKPFVLLNDLSDLLMLPKDMLIDRHVREEVCP SITLSLIIRVLCNFTPDEFCPDPVPGTVLEALNAETIAERRLSAESVRSFPYAAAAVVYVPPSSSNVAEKVAEAGGKSHL ARNVSAVQRRGYTSDEELEELDSPLTSIIDKLPLSPTVSANGQDNQKEHKSYTTTTNARYQLLREVWSM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 134 | 134 | - | – | |
| MobiDBLite | 13 | 27 | 15 | - | – | |
| MobiDBLite | 28 | 42 | 15 | - | – | |
| MobiDBLite | 43 | 83 | 41 | - | – | |
| MobiDBLite | 84 | 121 | 38 | - | – | |
| PANTHER | 135 | 708 | 574 | 7.7E-265 | – | |
| PANTHER | 135 | 708 | 574 | 7.7E-265 | – | |
| MobiDBLite | 150 | 172 | 23 | - | – | |
| MobiDBLite | 156 | 172 | 17 | - | – | |
| Coils | 176 | 203 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0722800.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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