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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • cd09272
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We have found 266 results. Now displaying 1 of 6 with 50 rows per page. This search has taken 0.112s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. PREDICTED: dynamin-2B-like [Glycine max] gi|356522123|ref|XP_003529699.1| chr0 97966111 97995708 -
n.a. Aspartyl-tRNA synthetase [Medicago truncatula] gi|357471639|ref|XP_003606104.1| chr0 136527791 136528643 -
n.a. retrotransposon like protein [Arabidopsis thaliana] gi|5302802|emb|CAB46043.1| chr0 178943144 178944094 -
n.a. Putative polyprotein [Oryza sativa] gi|18652495|gb|AAL77129.1|AC098566_16 chr2 34015229 34015947 +
n.a. gag-pol polyprotein [Glycine max] gi|29423282|gb|AAO73529.1| chr6 26800969 26802177 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SS25|A0A151SS25_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0012600_LC LjG1.1_chr1 1589327 1590781 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0016200_LC LjG1.1_chr1 2064621 2065217 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247148 2248279 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0018100_LC LjG1.1_chr1 2247535 2248130 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0018200_LC LjG1.1_chr1 2240345 2240941 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0020800_LC LjG1.1_chr1 2558546 2559142 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0030600_LC LjG1.1_chr1 3913235 3917905 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0033500_LC LjG1.1_chr1 4365661 4366352 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0033500_LC LjG1.1_chr1 4365661 4366352 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0034600_LC LjG1.1_chr1 4593171 4593767 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151U3B8|A0A151U3B8_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0037500_LC LjG1.1_chr1 5247271 5259850 -
n.a. Pol polyprotein; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0069200 LjG1.1_chr1 9560405 9566650 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0073100_LC LjG1.1_chr1 10226161 10226757 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151SFY7|A0A151SFY7_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0076500_LC LjG1.1_chr1 11014668 11015264 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0090200_LC LjG1.1_chr1 13160069 13160727 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0106200_LC LjG1.1_chr1 16525370 16525966 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0113700_LC LjG1.1_chr1 17812207 17817770 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0123900_LC LjG1.1_chr1 19654875 19655471 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0163400_LC LjG1.1_chr1 30762416 30763008 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151QNH5|A0A151QNH5_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0163700 LjG1.1_chr1 30903072 30919271 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0164500_LC LjG1.1_chr1 31035444 31036038 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151RC48|A0A151RC48_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0174200_LC LjG1.1_chr1 33292652 33293701 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0181800_LC LjG1.1_chr1 35484063 35484658 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A151REL6|A0A151REL6_CAJCA Copia protein; Found in the gene: LotjaGi1g1v0195200_LC LjG1.1_chr1 38712509 38715442 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SUC2|A0A151SUC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0196300_LC LjG1.1_chr1 39310348 39311127 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0197800_LC LjG1.1_chr1 40972082 40972678 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151TB60|A0A151TB60_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0203800_LC LjG1.1_chr1 43815494 43816560 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0217600_LC LjG1.1_chr1 48179836 48180431 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0226900_LC LjG1.1_chr1 52443830 52471272 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0232600_LC LjG1.1_chr1 54663805 54664403 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0237400_LC LjG1.1_chr1 56520599 56521194 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A151SUC2|A0A151SUC2_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0239500_LC LjG1.1_chr1 57139962 57141468 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0256400_LC LjG1.1_chr1 62053667 62054263 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0263100_LC LjG1.1_chr1 64454104 64454699 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0287400_LC LjG1.1_chr1 69763777 69764373 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: ATMG00810.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg00810; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0292800_LC LjG1.1_chr1 71038392 71038990 +
n.a. Transposon protein, putative, CACTA, En/Spm sub-class; TAIR: AT5G41980.1 nuclease; Swiss-Prot: sp|Q9M2U3|ALPL_ARATH Protein ALP1-like; TrEMBL-Plants: tr|A5BND9|A5BND9_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0313100 LjG1.1_chr1 75730811 75737523 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0329500_LC LjG1.1_chr1 78528532 78529128 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A0A151SEX3|A0A151SEX3_CAJCA Retrovirus-related Pol polyprotein from transposon TNT 1-94; Found in the gene: LotjaGi1g1v0348800_LC LjG1.1_chr1 81780781 81787832 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0374100_LC LjG1.1_chr1 85224430 85225027 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0398200_LC LjG1.1_chr1 88481997 88482593 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J6KQ13|A0A1J6KQ13_NICAT Putative mitochondrial protein; Found in the gene: LotjaGi1g1v0404400_LC LjG1.1_chr1 89338344 89338940 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0424200_LC LjG1.1_chr1 91882690 91883286 +
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A0V0HRA1|A0A0V0HRA1_SOLCH Putative ovule protein; Found in the gene: LotjaGi1g1v0427800_LC LjG1.1_chr1 92217087 92217683 -
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P04146|COPIA_DROME Copia protein; TrEMBL-Plants: tr|A0A1J3CAE7|A0A1J3CAE7_NOCCA Copia protein; Found in the gene: LotjaGi1g1v0427800_LC LjG1.1_chr1 92217087 92219213 -