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IPR003567 is a Cytochrome c-type biogenesis protein.
<p>Within mitochondria and bacteria, a family of related proteins is involved in the assembly of periplasmic c-type cytochromes: these include CycK [[cite:PUB00002276]], CcmF [[cite:PUB00002274], [cite:PUB00003599]], NrfE [[cite:PUB00006649]] and CcbS [[cite:PUB00006642]]. These proteins may play a role in guidance of apocytochromes and haem groups for their covalent linkage by the cytochrome-c-haem lyase. Members of the family are probably integral membrane proteins, with up to 16 predicted transmembrane (TM) helices.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Heme transporter activity | Enables the directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells. | ||
Biological process | Heme transport | The directed movement of heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Biological process | Cytochrome complex assembly | The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1| | 11 | ||
– | Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1| | 13 | ||
– | Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1| | 13 | ||
– | Cytochrome c biogenesis; TAIR: ATMG00960.1 Cytochrome C assembly protein (ChrM); Swiss-Prot: sp|Q04647|CCBS_DAUCA Probable cytochrome c biosynthesis protein; TrEMBL-Plants: tr|R4IV25|R4IV25_VICFA Cytochrome b biogenesis FN; Found in the gene: LotjaGi5g1v0122500 | 12 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
TRANSMEMBRANE | Phobius | 1 | 25.00 |