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GO:0017004

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description Cytochrome complex assembly
Full defintion The aggregation, arrangement and bonding together of a cytochrome complex. A cytochrome complex is a protein complex in which at least one of the proteins is a cytochrome, i.e. a heme-containing protein involved in catalysis of redox reactions.
Subterm of

Relationships

The relationship of GO:0017004 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCmah

Associated Lotus transcripts 23

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0062489.1
– Cytochrome c biogenesis C (mitochondrion) [Glycine max] gi|476507671|ref|YP_007516851.1|
GO terms
5
Lj0g3v0071749.1
– Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1|
GO terms
5
Lj0g3v0105229.1
– Non-intrinsic ABC protein 10 [Theobroma cacao] gi|508782333|gb|EOY29589.1|
GO terms
2
Lj0g3v0197329.1
– Chloroplast biogenesis protein [Lotus japonicus] gi|27464259|gb|AAO16018.1|
GO terms
3
Lj0g3v0197339.1
– Chloroplast biogenesis protein [Lotus japonicus] gi|27464259|gb|AAO16018.1|
GO terms
3
Lj3g3v3242100.1
– PREDICTED: cytochrome c-type biogenesis protein CcmE-like [Glycine max] gi|356544549|ref|XP_003540712.1|
GO terms
3
Ljchlorog3v0013290.1
– Cytochrome c biogenesis protein [Lotus japonicus] gi|13518486|ref|NP_084844.1|
GO terms
2
Ljmitog3v0000120.1
– Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1|
GO terms
5
Ljmitog3v0000590.1
– Cytochrome c biogenesis FN [Vigna radiata] gi|323149043|ref|YP_004222823.1|
GO terms
5
LotjaGi2g1v0077200_LC.1
– Sulfate/thiosulfate import ATP-binding protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A078I7I5|A0A078I7I5_BRANA BnaA09g12540D protein; Found in the gene: LotjaGi2g1v0077200_LC
GO terms
2
LotjaGi2g1v0077200_LC.2
– Sulfate/thiosulfate import ATP-binding protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A078I7I5|A0A078I7I5_BRANA BnaA09g12540D protein; Found in the gene: LotjaGi2g1v0077200_LC
GO terms
2
LotjaGi3g1v0305000_LC.1
– ATP-binding cassette protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A078I7I5|A0A078I7I5_BRANA BnaA09g12540D protein; Found in the gene: LotjaGi3g1v0305000_LC
GO terms
2
LotjaGi3g1v0305000_LC.2
– ATP-binding cassette protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A078I7I5|A0A078I7I5_BRANA BnaA09g12540D protein; Found in the gene: LotjaGi3g1v0305000_LC
GO terms
2
LotjaGi3g1v0305000_LC.3
– ATP-binding cassette protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A078I7I5|A0A078I7I5_BRANA BnaA09g12540D protein; Found in the gene: LotjaGi3g1v0305000_LC
GO terms
2
LotjaGi3g1v0323200.1
– Cytochrome c-type biogenesis ccda-like chloroplastic protein; TAIR: AT5G54290.1 cytochrome c biogenesis protein family; Swiss-Prot: sp|Q2QY07|CCDA2_ORYSJ Cytochrome c-type biogenesis ccda-like chloroplastic protein 2; TrEMBL-Plants: tr|Q8GZD1|Q8GZD1_LOTJA Chloroplast biogenesis protein; Found in the gene: LotjaGi3g1v0323200
GO terms
3
LotjaGi3g1v0494200.1
– Cytochrome C-type biogenesis protein CcmE; TAIR: AT3G51790.1 transmembrane protein G1P-related 1; Swiss-Prot: sp|Q2RYF4|CCME_RHORT Cytochrome c-type biogenesis protein CcmE; TrEMBL-Plants: tr|A0A1J7G785|A0A1J7G785_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0494200
GO terms
4
LotjaGi3g1v0494200.2
– Cytochrome C-type biogenesis protein CcmE; TAIR: AT3G51790.1 transmembrane protein G1P-related 1; Swiss-Prot: sp|Q2RYF4|CCME_RHORT Cytochrome c-type biogenesis protein CcmE; TrEMBL-Plants: tr|I1LQI6|I1LQI6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0494200
GO terms
4
LotjaGi4g1v0286000.1
– ATP-binding cassette protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A151TWV4|A0A151TWV4_CAJCA ABC transporter I family member 1; Found in the gene: LotjaGi4g1v0286000
GO terms
2
LotjaGi4g1v0286000.2
– ATP-binding cassette protein; TAIR: AT1G63270.1 non-intrinsic ABC protein 10; Swiss-Prot: sp|Q9C8T1|AB1I_ARATH ABC transporter I family member 1; TrEMBL-Plants: tr|A0A151TWV4|A0A151TWV4_CAJCA ABC transporter I family member 1; Found in the gene: LotjaGi4g1v0286000
GO terms
2
LotjaGi5g1v0122500.1
– Cytochrome c biogenesis; TAIR: ATMG00960.1 Cytochrome C assembly protein (ChrM); Swiss-Prot: sp|Q04647|CCBS_DAUCA Probable cytochrome c biosynthesis protein; TrEMBL-Plants: tr|R4IV25|R4IV25_VICFA Cytochrome b biogenesis FN; Found in the gene: LotjaGi5g1v0122500
GO terms
5
LotjaGi5g1v0122600.1
– Cytochrome c biogenesis B; TAIR: ATMG00110.1 cytochrome C biogenesis 206 (ChrM); Swiss-Prot: sp|P93280|CCMB_ARATH Putative cytochrome c biogenesis ccmB-like mitochondrial protein; TrEMBL-Plants: tr|M1FP81|M1FP81_SOYBN Cytochrome c biogenesis B; Found in the gene: LotjaGi5g1v0122600
GO terms
4
LotjaGi5g1v0223100.1
– Cytochrome c biogenesis protein CcsA; TAIR: ATCG01040.1 Cytochrome C assembly protein (ChrC); Swiss-Prot: sp|Q9BBP4|CCSA_LOTJA Cytochrome c biogenesis protein CcsA; TrEMBL-Plants: tr|A0A0K0LNH5|A0A0K0LNH5_WISFL Cytochrome c biogenesis protein CcsA; Found in the gene: LotjaGi5g1v0223100
GO terms
2
LotjaGi5g1v0223100.2
– Cytochrome c biogenesis protein CcsA; TAIR: ATCG01040.1 Cytochrome C assembly protein (ChrC); Swiss-Prot: sp|Q9BBP4|CCSA_LOTJA Cytochrome c biogenesis protein CcsA; TrEMBL-Plants: tr|A0A0K0LNH5|A0A0K0LNH5_WISFL Cytochrome c biogenesis protein CcsA; Found in the gene: LotjaGi5g1v0223100
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0020037
Molecular function Heme binding 1 4.35