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IPR006633 is a Carbohydrate-binding/sugar hydrolysis domain.
<p>The CASH domain is shared by many carbohydrate-binding proteins and sugar hydrolases. The CASH domain is characterised by internal repetitions of glycines and hydrophobic residues that correspond to the repetitive units of a predicted or observed right-handed β-helix structure of the pectate lyase superfamily. The basic structural unit of this family consists of three β-strands that form a single turn of the β-helix. Each turn contains ~20 amino acids, and is normally repeated between 7 and 11 times to form the elongated helix structure. The repeats show a low degree of sequence identity when compared with each other. The region of homology with the CASH domain corresponds to the core region of the β-helix, covering from the second to the sixth repeat [[cite:PUB00007977]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Pectinesterase; TAIR: AT2G45220.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|O04887|PME2_CITSI Pectinesterase 2; TrEMBL-Plants: tr|A0A072UI35|A0A072UI35_MEDTR Pectinesterase; Found in the gene: LotjaGi3g1v0208000 | 29 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd15798 | CDD | 1 | 100.00 |