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IPR007265 is a Conserved oligomeric Golgi complex, subunit 3.
<p>This entry includes Conserved oligomeric Golgi complex subunit 3 (COG3, also known as Sec34), a component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking [[cite:PUB00009854]]. COG is a member of the complexes associated with tethering containing helical rods (CATCHR) family which also includes the exocyst, GARP and DSL1 complexes, which are evolutionarily related and share structural features consisting of α-helical bundles towards the C-terminal and an N-terminal coiled-coil region [[cite:PUB00100048], [cite:PUB00100047]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Cis-Golgi network | The network of interconnected tubular and cisternal structures located at the convex side of the Golgi apparatus, which abuts the endoplasmic reticulum. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Conserved oligomeric Golgi complex subunit [Medicago truncatula] gi|357479305|ref|XP_003609938.1| | 2 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 3-like [Glycine max] gi|356565620|ref|XP_003551037.1| | 6 | ||
| – | PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 3-like [Glycine max] gi|356565620|ref|XP_003551037.1| | 4 | ||
| – | Conserved oligomeric Golgi complex subunit 3; TAIR: AT1G73430.1 sec34-like family protein; Swiss-Prot: sp|Q8CI04|COG3_MOUSE Conserved oligomeric Golgi complex subunit 3; TrEMBL-Plants: tr|K7LZ48|K7LZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0319500 | 6 | ||
| – | Conserved oligomeric Golgi complex subunit 3; TAIR: AT1G73430.1 sec34-like family protein; Swiss-Prot: sp|Q96JB2|COG3_HUMAN Conserved oligomeric Golgi complex subunit 3; TrEMBL-Plants: tr|K7LZ48|K7LZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0319500 | 6 | ||
| – | Conserved oligomeric Golgi complex subunit 3; TAIR: AT1G73430.1 sec34-like family protein; Swiss-Prot: sp|Q54TT4|COG3_DICDI Conserved oligomeric Golgi complex subunit 3; TrEMBL-Plants: tr|K7LZ48|K7LZ48_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0319500 | 3 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR13302 | PANTHER | 1 | 16.67 |