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IPR009215 is a TIM-barrel domain, IGPS-like.
<p>This domain is likely to have a TIM barrel fold, related to IGPS (indole-3-glycerol-phosphate synthase). Interestingly, this novel domain also exists as an N-terminal domain of a putative sigma<SUP>54</SUP>-dependent transcriptional activator. Because sigma<SUP>54</SUP>dependent activators typically have a three-domain structure: the variable N-terminal regulatory (activation) domain involved in signal recognition/receiving, the central AAA-type ATPase domain, and the DNA-binding domain, the domain described by this entry may be predicted to play a role in signal recognition/receiving and signal transduction. However this has not been experimentally validated.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Tm-1^GCR26 protein [Medicago truncatula] gi|357518229|ref|XP_003629403.1| | 13 | ||
| – | PREDICTED: UPF0261 protein SACE_5696-like [Cicer arietinum] gi|502153328|ref|XP_004509303.1| | 9 | ||
| – | Tm-1 protein; TAIR: AT5G66420.2 TIM-barrel signal transduction protein; Swiss-Prot: sp|A4FLF6|Y5696_SACEN UPF0261 protein SACE_5696; TrEMBL-Plants: tr|G7LDW3|G7LDW3_MEDTR UPF0261 SACE-like protein; Found in the gene: LotjaGi4g1v0120500 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| cd15488 | CDD | 1 | 33.33 |