Domain Predictions — View

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IPR011692

Source: InterPro

Description

IPR011692 is a Stress up-regulated Nod 19.

<p>This family of plant proteins have been implicated in nodule development [[cite:PUB00007493]] in the legume Medicago truncatula (Barrel medic). MtN-19 was shown by Northern blot to be induced during nodulation [[cite:PUB00007493]]. The molecular function of these proteins is unknown.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0203179.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19-like protein [Medicago truncatula] gi\|357515145\|ref\|XP_003627861.1\|	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION	9
Lj4g3v0286110.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19-like protein [Pisum sativum] gi\|52550577\|gb\|AAU14999.2\|	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	11
Lj4g3v0286110.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19-like protein [Pisum sativum] gi\|52550577\|gb\|AAU14999.2\|	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK	10
Lj5g3v0845620.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19 protein [Lotus japonicus] gi\|283132375\|dbj\|BAI63593.1\|	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-TM_GRAM_NEGATIVE SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK	12
Lj6g3v1629960.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19 protein [Lotus japonicus] gi\|283132375\|dbj\|BAI63593.1\|	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM_EUK TMhelix	11
Lj6g3v1629960.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	MtN19 protein [Lotus japonicus] gi\|283132375\|dbj\|BAI63593.1\|	Domains IPR011692 PF07712 PTHR33390 PTHR33390:SF1 TMhelix	5
LotjaGi1g1v0739100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp\|Q8VZZ4\|AB6C_ARATH ABC transporter C family member 6; TrEMBL-Plants: tr\|D2KTV9\|D2KTV9_LOTJA MtN19 protein; Found in the gene: LotjaGi1g1v0739100_LC	Domains CYTOPLASMIC_DOMAIN IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF5 TRANSMEMBRANE	7
LotjaGi3g1v0058200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp\|Q6F0L7\|RPOB_MESFL DNA-directed RNA polymerase subunit beta; TrEMBL-Plants: tr\|A0A151QQZ2\|A0A151QQZ2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0058200_LC	Domains IPR011692 PF07712 PTHR33390 PTHR33390:SF4	4
LotjaGi4g1v0026300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; TrEMBL-Plants: tr\|A0A072UNX5\|A0A072UNX5_MEDTR Stress up-regulated Nod 19 protein; Found in the gene: LotjaGi4g1v0026300	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM	9
LotjaGi4g1v0026300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp\|Q9BGY6\|LRC53_MACFA Leucine-rich repeat-containing protein 53; TrEMBL-Plants: tr\|A0A072UNX5\|A0A072UNX5_MEDTR Stress up-regulated Nod 19 protein; Found in the gene: LotjaGi4g1v0026300	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM	9
LotjaGi4g1v0026300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp\|P13952\|CCNB_SPISO G2/mitotic-specific cyclin-B; TrEMBL-Plants: tr\|Q64EX4\|Q64EX4_PEA MtN19-like protein; Found in the gene: LotjaGi4g1v0026300	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM	9
LotjaGi6g1v0269900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp\|I7C6E8\|C7A52_PANGI Beta-amyrin 28-oxidase; TrEMBL-Plants: tr\|D2KTV9\|D2KTV9_LOTJA MtN19 protein; Found in the gene: LotjaGi6g1v0269900	Domains IPR011692 NON_CYTOPLASMIC_DOMAIN PF07712 PTHR33390 PTHR33390:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SignalP-noTM TMhelix	11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TMhelix	TMHMM	1	8.33