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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0269900 |
| Transcript ID | LotjaGi6g1v0269900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Stress up-regulated Nod 19 protein; TAIR: AT5G61820.1 stress up-regulated Nod 19 protein; Swiss-Prot: sp|I7C6E8|C7A52_PANGI Beta-amyrin 28-oxidase; TrEMBL-Plants: tr|D2KTV9|D2KTV9_LOTJA MtN19 protein; Found in the gene: LotjaGi6g1v0269900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:58432958..58437569) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAATGGAGGGGAGGGGAGGGGAGGGGAGGGATTTTTAAAATTTGATTTTGTTTGGTTCAAACTTTAGGAGGGGAGGA GAGGGGAACGGAGGGGAGCAAAATCCCTCCAATCTCAATTAAGAGGGGAAATAAATTTCGGACAAAAATAGCTCTACTCA AATTTAAAAATTCCAATCTTTTATCCTAGGGTTTCCCTTCTTCATTTCACGTTATTTTCTTCCTTCTTCAAACCAAACAC TGCTGCCCCCTCTCCGATCTCTTTCTCCGCCGCTTTGATTGATCAATCGGTCATGTTTTTATCTATATAGCCCTTTTTGT TTGATTACTAGTTTTGTTTTTGTTACTGTGTGAACTTGATTGTGGGTCTGATATTTCACCTGGTTTGCTGTGGGTTGTTT TTTCCTTCATTGCTCCACTGGTTTGTTGTGTAATTATGCACCGAGTTTCTCCTTCTTCTTTGGCACTGGATAGCTTTTGG CCTAGTCCCACAGGGTGTTTCTTCCACGATGGTGATTGGTTCTCATCTTGTGATTGGATTCGTGGGGCAGCAGTAGGTGT TCTTTTGCGTTTTTCTTGCTGTTTCCATGTCCCCTGTTCCTTTCTTTCTTTTTCTTTTCATATGTTTTGTTTAAATTGAT GAAATAGTTGACATTATTACTGGTAATAAATCTTGCAGTTTTGTTGATGATGGGTATAAAAGTAATTTTAATTATAAAAT ATCTTCCCACCCCTCATGAATCAAATAAAAAAAAGTTATTTTCCCTTCCCTCTCTTTGTGAACCAAACGTAATAAGTATT AAAATTTCTCCCCTCCCTTCCCCTCCCCTCCCCTCCCCTCCATTAAAATCCCTCCCCTCCCCTCCCCTCATTTGAACCAA ACAGTATGTAAAAGTATTCAATATTGGAACCTGAGACCCAAAATTTAATAAGAAACAATAGCATATGTCAATGAAACCTG AGCTTTCTAGTTTTCTTTAATTCCTGGTATATGCGTAGCCTTTATATTCAAATCCTATTTGATTAGAAACATTCAAACTT CATATATTAATGTTTGGCAAAACGTCATGCTTACTTGCTTGGAGCATCTGAAAATGCACTATATATACTTCACCTATGCT ATATAAATCTTTGTCTCAAGCTGGTAATTAACAGTACTTGAACAATCGTTTAGAAGTTGAAATCTCGTGCTTACTGTTAT ACTCCTTTCTCTTGCCAAAGCCCAAATGTTTGAGGTATGTATGCTCCTTCATATCTTTCATAAACATGTTTTACTTCTAC CATGTCTCCACAATCCATAGGTTGACTTCATTAAGGCGAATGAACTTACCTATCAAAGCTAATATCACTTCCTTTGGTTG CTCATAAATTTGTCCTATTAGTAGTACTGGTAAAAATTATCATGTAAGATGTAAGTTTGTAACTGCTCCACTCATATATT TTGTAACTAACATGACAATTCATTGGTGAGATAGAAAATTAACACACCGTTTAAAAGTAGAGAAAATATTCATCCAATGT TTGACATGTCTTCTGTTTTCTCTTTCGAATATACTCACCTTAGTGAAAGCTTCAAATCCATATTTGTTTTAGTTTTCTAC TTTGTTAGTAAAAAAATGGTTCGCCATATATAGTTTAAGATAACATCTTCTTAATTCAAAACCTTGATCCTTTTGATTTC TTCCAATTAATATTATTGCTAATAAAGAATATGCTAAACAGATCAACATGAGTTTTCTGTCTCGAGGTTGGGTGCTTTCA TGGGCACTGCTACTTTTGGTGTACTCATCAGCTGCTTTTGGGAAGACTAAAAACAATGAGAAGTCAGCTGTTTTTCTATC TCCCATGTTTGAACTTGGTCCAGGATCAGTTGCTAATAAACTTTTCTATGATGTTGAGTTTCCAAGAGGCCATATTGCAC TCAAGAGTTTCAATGCTGAAGTTGTTGATGAGGCAGGGAACTCTGTTTCTCTCCAAGAAACTTATCTCCACCATTGGATT GTCATAAGATACCATCATCTGAAAAATGTGACAGATCCATCAGATATTGATGTAGTGAGTAACAGTGGCTTGTGCCAAGA AGGTACTCTTAATTACTATTTTGGTGTTGGATCTGAAACAAGAGGAACAGCTTCCCACATTCCAGACCCTTTTGGGATAG AAGTAGGAAATCCTAAAGAAATTCCAAAAGGGTATGAGGAGAAGTGGCTGATCAATTCTCATGCTATTGATACAAGGGGT GTGGCAGAGAGGTTAGGGTGTGCTGAGTGCAGGTGTGACTTGTATAATATTACAACTGATGGAGATGGAAAACCCTTGGG TCCAGATTATGGTGGAGGTTTGCAGTGTTGTCCTGATAAGGCCCAGTGCAAGCTGAGGAAAGGATTTTTGGGTCCAAAGA GAAAGTTGTACCTGAAATACACAGTAAAGTGGGTTGAATGGGATAATTTTGTGGTGCCTGTTAAGGTTTATGTGCTTGAT GTGACTGATACTTTGAACAAATCTAAAGGAATGAGTCCACAACATAATTGCAAAGTAAGTTGAATTCTCAAGATATTCTT TTATGCTCTCCAGGGAATATAAAATCATTGAATTAGGGAATTGGACCCAAACAACTTTTGAAAATAGATCAAATATATGC TACAAAGATTTTCAATTAGTTAATCTTGTTTCTTAAAAAATATTATTTAGTCTATAAGTTTACTTGATAGGTAGAAATTA TACAAAAGTACCAACACTTAACGTACACTACAATTTTCTCTTTATCTCTAATTTTTTATCCAACCAAATCACATTATATA TTATATTGATTACTTCTCTCTCGTGTTAAAAGTTTTCCCACCTTGTATTTTGTATATTTATATGTTATAGTCCACATGTG ATTTCTTTGGGTGTAAGTGAGTACCAGAGATTTTTTGCTACAGATTGAGTATGATGTTAAACCTTGGAGCAAAGGCCATG CGAATGGTAGTGGTTACCTTGATGTGAAGAGAGCAAGCCTTCCAATACCAACTGGTGGTTATGTCATCTATGGTGCTGGT CATCTGCATATAGGTGGAACTGGATCAACTCTTTATGGACAGGTGACATTAAATAATTACAATCATTCTAAATGTTTGAA TAGTACTTTCTAGGCACATGAATAATATACACATACCAACATGTGAGTAGTTCCAGTGGTACATATTTATTTCTCTTTAT GCAAGGTTTCAAATTAGAGTCTTGTCGATGAAAAATAATAAACCGGTAGATATTTTAACTATATAGTGAATACTTGAGTA GAACTTATTTTCTGACATTTTGACTGACATTTTCAGGATGGGAGGGTTATATGTTCTTCATTACCAAGATATGGAACTGG AAAGAAAGTAGGAAATGAGAAGGGGTACCTTGTTGCAATGTCCACCTGTTACCCTAGGCCAGGTTCTGAAAAGATCAAAA ATGGTGAAACTTTATCTCTAGAAATTACCTACAACAACAGCATAGGTCACACTGGAGTGATGGGGCTCTTCTATATCTTG GTGGCAGAGAAGCTTCCACACCATCACCTTTGATTATTATTATACTTGTTATGATTAAAATATGTTATGATATTTGTGGT GTATGAATAAGTAAACAAGTTATGATGTAAATAAAGTCAGATTGGAGGCTTGTAATTGGTAAGTACCTATAACTATACTA GTTGCACCTTCAGGATAACTCAACATTCTTTATATATGATGAAGAATGCAAAAATCTGATTATCAATCACTTCTTTGCGA TGGAGTTACCAATCATATAATACTTTTGTTTATGTCTTTATCAAGTACGTTATTTTATCTGAGCTCTGGATCATATCATA ACTCTCCGACTATGATCTATGAAATGAAAAAAATTCACAACTTATATATTATGCCTGATATTTACTTATCATCTATAACT AGAATGGCCATTTACAATTGCTCAAAAAATACAACACACTAGGCATGTAATGTACATCACTTGCGGTGTGTTTGCTGCAG CAAGCTCTTCAAAATTTCCTTGCAGGCTAGCTTCTTGGCTGTTCTTCTATCAGCAAGACCCCTGTACTTGTGCTGGTGAA TGACCCCATCATTAGTTTCTACCTTTATTGTACAATTAAGAACATCCTCCTCGCGGTACAAGTCCTCTTTCAAAGTATAA TTTCTTCTCTGGCATAGTATATGCAACTCTGCGGCGGGATGGAGCTTGAATGTTTCAGGTGTCACAAGGGGTTCCAAAAG AGGTCTTATACTTCGCCACACAACCTCCTTATTGTATCCTGAATCAACAAGAATTGCTCCAGCCAGAGACTCTATAATGT CCCCAAGTACCTATCAGACGAAGAATAGGAACAATCTCAGCAGTTACATAGAGAAGGTACTAAACAAGGAAATAAGTTAC TATTTCTAGAAATGGTGCACGCCACCTAGTGTCCTAGCAAACTTAAAAGATTGCAAGAGAAGAATTGAAAACCAGAATAA TGCTGCTGTCAAACTTAAAAGAAAAATGCCAAGAAGTTTGAATGTATTTTCATGAAACAACATACAAATGGATAACAATG ATGAGTTTTATGCACTTTATCAGTTATTACACATAAAATATTCAACTTTGCT
CDS sequence (LotjaGi6g1v0269900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGAGATCAACATGAGTTTTCTGTCTCGAGGTTGGGTGCTTTCATGGGCACTGCTACTTTTGGTGTACTCATCAGC TGCTTTTGGGAAGACTAAAAACAATGAGAAGTCAGCTGTTTTTCTATCTCCCATGTTTGAACTTGGTCCAGGATCAGTTG CTAATAAACTTTTCTATGATGTTGAGTTTCCAAGAGGCCATATTGCACTCAAGAGTTTCAATGCTGAAGTTGTTGATGAG GCAGGGAACTCTGTTTCTCTCCAAGAAACTTATCTCCACCATTGGATTGTCATAAGATACCATCATCTGAAAAATGTGAC AGATCCATCAGATATTGATGTAGTGAGTAACAGTGGCTTGTGCCAAGAAGGTACTCTTAATTACTATTTTGGTGTTGGAT CTGAAACAAGAGGAACAGCTTCCCACATTCCAGACCCTTTTGGGATAGAAGTAGGAAATCCTAAAGAAATTCCAAAAGGG TATGAGGAGAAGTGGCTGATCAATTCTCATGCTATTGATACAAGGGGTGTGGCAGAGAGGTTAGGGTGTGCTGAGTGCAG GTGTGACTTGTATAATATTACAACTGATGGAGATGGAAAACCCTTGGGTCCAGATTATGGTGGAGGTTTGCAGTGTTGTC CTGATAAGGCCCAGTGCAAGCTGAGGAAAGGATTTTTGGGTCCAAAGAGAAAGTTGTACCTGAAATACACAGTAAAGTGG GTTGAATGGGATAATTTTGTGGTGCCTGTTAAGGTTTATGTGCTTGATGTGACTGATACTTTGAACAAATCTAAAGGAAT GAGTCCACAACATAATTGCAAAATTGAGTATGATGTTAAACCTTGGAGCAAAGGCCATGCGAATGGTAGTGGTTACCTTG ATGTGAAGAGAGCAAGCCTTCCAATACCAACTGGTGGTTATGTCATCTATGGTGCTGGTCATCTGCATATAGGTGGAACT GGATCAACTCTTTATGGACAGGATGGGAGGGTTATATGTTCTTCATTACCAAGATATGGAACTGGAAAGAAAGTAGGAAA TGAGAAGGGGTACCTTGTTGCAATGTCCACCTGTTACCCTAGGCCAGGTTCTGAAAAGATCAAAAATGGTGAAACTTTAT CTCTAGAAATTACCTACAACAACAGCATAGGTCACACTGGAGTGATGGGGCTCTTCTATATCTTGGTGGCAGAGAAGCTT CCACACCATCACCTTTGA
Protein sequence (LotjaGi6g1v0269900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFEINMSFLSRGWVLSWALLLLVYSSAAFGKTKNNEKSAVFLSPMFELGPGSVANKLFYDVEFPRGHIALKSFNAEVVDE AGNSVSLQETYLHHWIVIRYHHLKNVTDPSDIDVVSNSGLCQEGTLNYYFGVGSETRGTASHIPDPFGIEVGNPKEIPKG YEEKWLINSHAIDTRGVAERLGCAECRCDLYNITTDGDGKPLGPDYGGGLQCCPDKAQCKLRKGFLGPKRKLYLKYTVKW VEWDNFVVPVKVYVLDVTDTLNKSKGMSPQHNCKIEYDVKPWSKGHANGSGYLDVKRASLPIPTGGYVIYGAGHLHIGGT GSTLYGQDGRVICSSLPRYGTGKKVGNEKGYLVAMSTCYPRPGSEKIKNGETLSLEITYNNSIGHTGVMGLFYILVAEKL PHHHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 30 | 30 | - | – | |
| PANTHER | 6 | 404 | 399 | 3.8E-203 | – | |
| PANTHER | 6 | 404 | 399 | 3.8E-203 | ||
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| Phobius | 24 | 27 | 4 | - | – | |
| Phobius | 28 | 405 | 378 | - | – | |
| Pfam | 35 | 399 | 365 | 1.4E-170 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0269900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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