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IPR011722

Source: InterPro

Description

IPR011722 is a Hemimethylated DNA-binding domain.

<p>Heat shock protein HspQ, also known as YccV, is an Escherichia coli hemimethylated DNA binding protein which has been shown to regulate dnaA gene expression [[cite:PUB00015300], [cite:PUB00104944]].</p> <p>This entry represents a YccV-like hemimethylated DNA binding domain that can also be found in longer eukaryotic proteins, such as F-box only protein 21 from mammals and ClpF from Arabidopsis.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Associated Lotus transcripts 3

Transcript Name Description Predicted domains Domain count
Lj2g3v1267210.1
– F-box only protein [Medicago truncatula] gi|357487407|ref|XP_003613991.1|
Domains
8
Lj2g3v1267210.2
– UvrB/uvrC motif-containing protein [Arabidopsis thaliana] gi|42568906|ref|NP_178438.2|
Domains
9
LotjaGi2g1v0298000.1
– Heat shock protein HspQ; TAIR: AT2G03390.1 uvrB/uvrC motif-containing protein; Swiss-Prot: sp|Q67Y99|CLPF_ARATH Clp protease adapter protein ClpF, chloroplastic; TrEMBL-Plants: tr|A0A151TFI2|A0A151TFI2_CAJCA F-box only protein 21; Found in the gene: LotjaGi2g1v0298000
Domains
12

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TIGR02097 TIGRFAM 1 33.33