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IPR019312

Source: InterPro

Description

IPR019312 is a CCR4-NOT transcription complex subunit 11.

<p>The CCR4-NOT complex plays a key role in mRNA decay in all eukaryotes, thereby contributing importantly to gene expression regulation [[cite:PUB00083182]]. Human C2ORF29 proteins, also known as CNOT11, is a component of the CCR4-NOT complex. CNOT11 interacts with the first amino acids of CNOT1 and with CNOT10 and is required for the association of CNOT10 with the CCR4-NOT complex [[cite:PUB00083181]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0030014
Cellular component CCR4-NOT complex The evolutionarily conserved CCR4-NOT complex is involved in several aspects of mRNA metabolism, including repression and activation of mRNA initiation, control of mRNA elongation, and the deadenylation and subsequent degradation of mRNA. In Saccharomyces the CCR4-NOT complex comprises a core complex of 9 proteins (Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p), Caf4p, Caf16p, and several less well characterized proteins.
Subterm of

Associated Lotus transcripts 4

Transcript Name Description Predicted domains Domain count
Lj6g3v0003330.1
– PREDICTED: UPF0760 protein C2orf29-like [Glycine max] gi|356502904|ref|XP_003520254.1|
Domains
4
LotjaGi6g1v0002700.1
– CCR4-NOT transcription complex subunit 11; TAIR: AT5G18420.1 CCR4-NOT transcription complex subunit; Swiss-Prot: sp|Q9UKZ1|CNO11_HUMAN CCR4-NOT transcription complex subunit 11; TrEMBL-Plants: tr|I1JB78|I1JB78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002700
Domains
4
LotjaGi6g1v0002700.2
– CCR4-NOT transcription complex subunit 11; TAIR: AT5G18420.1 CCR4-NOT transcription complex subunit; Swiss-Prot: sp|Q9UKZ1|CNO11_HUMAN CCR4-NOT transcription complex subunit 11; TrEMBL-Plants: tr|I1JB79|I1JB79_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002700
Domains
4
LotjaGi6g1v0002700.3
– CCR4-NOT transcription complex subunit 11; TAIR: AT5G18420.1 CCR4-NOT transcription complex subunit; Swiss-Prot: sp|Q9UKZ1|CNO11_HUMAN CCR4-NOT transcription complex subunit 11; TrEMBL-Plants: tr|I1JB78|I1JB78_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0002700
Domains
4

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 25.00