Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR022309

Source: InterPro

Description

IPR022309 is a Ribosomal protein eS8/ribosomal biogenesis NSA2.

<p>This entry represents the small ribosomal subunit protein eS8 from archaea and eukaryotes [[cite:PUB00003471], [cite:PUB00110894]], which consists of a number of proteins with either about 220 amino acids (in eukaryotes) or about 125 amino acids (in archaea).</p> <p>This entry also contains proteins annotated as NSA2, which are though to be involved in ribosomal biogenesis of the 60S ribosomal subunit, having a role in the quality control of pre-60S particles. They are a component of the pre-66S ribosomal particle.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj1g3v2682540.1
– Ribosome biogenesis NSA2-like protein [Aegilops tauschii] gi|475482586|gb|EMT02990.1|
Domains
8
Lj1g3v2682540.2
– PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus] gi|449523511|ref|XP_004168767.1|
Domains
4
Lj1g3v3580650.1
– 40S ribosomal protein S8 [Zea mays] gi|162464180|ref|NP_001105391.1|
Domains
10
Lj2g3v1828480.1
– PREDICTED: ribosome biogenesis protein NSA2 homolog [Cucumis sativus] gi|449523511|ref|XP_004168767.1|
Domains
4
Lj3g3v0718230.2
– 40S ribosomal protein S8 [Zea mays] gi|162464180|ref|NP_001105391.1|
Domains
9
LotjaGi1g1v0395500.1
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|A0A151RLR2|A0A151RLR2_CAJCA 40S ribosomal protein S8; Found in the gene: LotjaGi1g1v0395500
Domains
11
LotjaGi1g1v0478200.1
– Ribosomal protein S8e/ribosomal biogenesis NSA2; TAIR: AT5G06360.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q54GN8|NSA2_DICDI Ribosome biogenesis protein NSA2 homolog; TrEMBL-Plants: tr|I3SG84|I3SG84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0478200
Domains
6
LotjaGi1g1v0592400.1
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3SIQ8|I3SIQ8_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi1g1v0592400
Domains
12
LotjaGi1g1v0592400.2
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|A0A0E0KPA7|A0A0E0KPA7_ORYPU 40S ribosomal protein S8; Found in the gene: LotjaGi1g1v0592400
Domains
12
LotjaGi2g1v0395700.1
– Ribosomal protein S8e/ribosomal biogenesis NSA2; TAIR: AT5G06360.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q54GN8|NSA2_DICDI Ribosome biogenesis protein NSA2 homolog; TrEMBL-Plants: tr|I3SG84|I3SG84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700
Domains
7
LotjaGi2g1v0395700.2
– Ribosomal protein S8e/ribosomal biogenesis NSA2; TAIR: AT5G06360.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q54GN8|NSA2_DICDI Ribosome biogenesis protein NSA2 homolog; TrEMBL-Plants: tr|I3SG84|I3SG84_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0395700
Domains
8
LotjaGi3g1v0089400.1
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3SIQ8|I3SIQ8_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi3g1v0089400
Domains
11
LotjaGi3g1v0089400.2
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3SIQ8|I3SIQ8_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi3g1v0089400
Domains
13
LotjaGi6g1v0150500.1
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3S9U3|I3S9U3_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi6g1v0150500
Domains
14
LotjaGi6g1v0150500.2
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3S9U3|I3S9U3_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi6g1v0150500
Domains
14
LotjaGi6g1v0150500.3
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3S9U3|I3S9U3_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi6g1v0150500
Domains
14
LotjaGi6g1v0150500.4
– 40S ribosomal protein S8; TAIR: AT5G59240.1 Ribosomal protein S8e family protein; Swiss-Prot: sp|Q08069|RS8_MAIZE 40S ribosomal protein S8; TrEMBL-Plants: tr|I3S9U3|I3S9U3_LOTJA 40S ribosomal protein S8; Found in the gene: LotjaGi6g1v0150500
Domains
13

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.88