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IPR024974 is a Sde2, ubiquitin domain.
<p>Sde2 (silencing defective 2) is a ubiquitin-fold-containing splicing regulator that supports splicing of selected pre-mRNAs in an intron-specific manner in Schizosaccharomyces pombe. Sde2 is translated as inactive precursor proteins harbouring the ubiquitin-fold domain linked through an invariant GGKGG motif to a C-terminal domain. The Sde2 protein has a ubiquitin-fold at its N-terminal, represented in this entry, which must be cleaved by the ubiquitin-specific proteases (USPs) Ubp5 and Ubp15. After cleavage, the C-terminal domain of Sde2, which starts with a lysine, gets incorporated into the spliceosome [[cite:PUB00091018], [cite:PUB00101934]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: protein SDE2 homolog [Cicer arietinum] gi|502113951|ref|XP_004494813.1| | 4 | ||
| – | Ubiquitin family protein; TAIR: AT4G01000.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q07G43|SDE2_XENTR Protein SDE2 homolog; TrEMBL-Plants: tr|G7L437|G7L437_MEDTR Telomere stability/silencing protein; Found in the gene: LotjaGi1g1v0792200 | 10 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 50.00 |