Domain Predictions — View

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IPR028064

Source: InterPro

Description

IPR028064 is a Transmembrane protein 154.

<p>The function of this family of transmembrane proteins has not, as yet, been determined. However, it is thought to be a therapeutic target for ovine lentivirus infection [[cite:PUB00067494]]. This family of proteins is found in eukaryotes and members are typically between 138 and 320 amino acids in length.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0113159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi\|356575757\|ref\|XP_003556003.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:2.60.120.200 G3DSA:3.30.200.20 IPR000719 IPR002902 IPR008271 IPR011009 IPR013320 IPR028064 NON_CYTOPLASMIC_DOMAIN PF00069 PF01657 PF15102 PS00108 PS50011 PS51473 PTHR27002 PTHR27002:SF122 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SSF56112 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE TMhelix TRANSMEMBRANE mobidb-lite	31
Lj0g3v0191879.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi\|356575757\|ref\|XP_003556003.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:2.60.120.200 G3DSA:3.30.200.20 IPR000719 IPR002902 IPR008271 IPR011009 IPR013320 IPR028064 NON_CYTOPLASMIC_DOMAIN PF00069 PF01657 PF15102 PS00108 PS50011 PS51473 PTHR27002 PTHR27002:SF122 SM00220 SSF56112 TMhelix TRANSMEMBRANE mobidb-lite	24
LotjaGi4g1v0397500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp\|Q8S9L6\|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr\|I1LEA4\|I1LEA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0397500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:3.30.200.20 G3DSA:3.30.430.20 IPR000719 IPR001245 IPR002902 IPR008271 IPR011009 IPR028064 IPR038408 NON_CYTOPLASMIC_DOMAIN PF01657 PF07714 PF15102 PS00108 PS50011 PS51473 PTHR27006 PTHR27006:SF207 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SSF56112 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd14066 mobidb-lite	32
LotjaGi4g1v0397500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp\|Q8S9L6\|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr\|I1LEA4\|I1LEA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0397500	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.510.10 G3DSA:3.30.200.20 G3DSA:3.30.430.20 IPR000719 IPR001245 IPR002902 IPR008271 IPR011009 IPR028064 IPR038408 NON_CYTOPLASMIC_DOMAIN PF01657 PF07714 PF15102 PS00108 PS50011 PS51473 PTHR27006 PTHR27006:SF207 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00220 SSF56112 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd14066 mobidb-lite	32

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00