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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0397500 |
| Transcript ID | LotjaGi4g1v0397500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|I1LEA4|I1LEA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0397500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77525136..77529983) extracted from Lotus japonicus Gifu genome v1.2.
AAAATCTCTTGGCAATCAACAGCATAAAGTGCTTTGACTTTTCATACCAAATAAACAAGATATATATTGACCTTTTGCTA ATCCTGCTATTTGATTGTGTCAAAAAAATGTGTCCACAAAAAGTTACAATCTCTTGATCTACATAAATGTTACAACTTGG AACCTAGCTGATCATAGGGACATTCCCTTCTAGTACAATGACACCTTCAAGAGTTTTTTCCCTTCTTTGTCTCCTTGTCA TACTTACATCTCACACCAATGCCCAGCCAAGCTTCTTGTACCATTTCTGCATGAATGATAAAGGCAACTACACTGAAAAC AGCACCTACAAGACCAACCTCAACACCCTCTTATCATCTCTTTCTTCCAACACACAAATTGATTATGGCTTCTACAATTT CTCTGAAGGCCAAAACTCTGACAAAGTTAACGCAATTGGGATGTGTAGAGGAGATGTTCAGCCAGAAACATGCCGCAGTT GCCTCAATGATTCAAGAGTCCTTCTCACGCAGCGTTGTCCAAACCAGAAAGAGGCTATTGGCTGGTATGATAACTGCATG TTGCGGTACTCAAACCGTTCAATATTTTCTGTCATGGAACCTCAACCTACATACTATTTGTGGACACAGAGCAATGCAAG TGATGTGGATCAGTTCAATCAAGTGCTTCAGGACTTGGTGGGAAGTTTGAGAAGTGAAGCTGCATCTGGTGATTCTCTTA AGAAGTATGCTGCAGGAAATGCAGCAGGGCCAAGCTTTCAAACTATATTTGCTCTTCTGCAATGCACTCCTGATTTGTCA GAGCAAGAGTGCAATGATTGCTTGGTGGAGGCTATCTCAGATATCTCAAGTTGTTGTGCTGGCAAGACAAGTGGGAGGAT TGGAAAACCAAGCTGCAATCTTAGATTTGATACTTCACCCTTCTATGACTCTACTACAACTGATGCCTCTCCTCCATCAC AATCACAAGTACCTCCTCCAGGCGCAAATAATACTTCCACAAAAGGTACCTGTTACGCAATACTTATAGCATGCTTAGAT CAATTTTTCTTTCCTCAGAATCAATTCTAGAACTCAGAAGCTACTTACAAGAGTTTCTCCCAAGAATTGATTCTGGCAGG ATTTCCAAACAACCAATTACAGTATGTTTAGAAACACGTTTAACCATGCTTAAAGCCAAAATAAATTCTAGGAGAGAAGC TCAAGTAAATAGTGTCTATACCTAAATATTGATTCTGATTTCTGAGAGAAAATGAAGGTGATCAAGACTACTAAATTTAT CCTGCTTCAAGCCATATCTATGTTGGTCAGTGTCTGCACTCAATGTTTTTTTGTGTGGCTTGTTTCCTTTCCCATCAATT AAACTGAACATATAACTGTTTTGCTAAAGTTCAACCTATAAGATGGGTATTTGGGGTTTCAGTTCTTCTATACATCACTA TTGACATCAAATATCTGAGTTAGTGTTCAACATGGAATTGTGGTTTTTGCAGGAAATAACAACACAACACGAATTGTCAT TGCGGTAGTTGTGCCAATTGTAGTCATCACTGTACTGGTCATATCTGTGTGCATCTTCTTAAGAGCAAGGAAGCAAAGGA GACATATTGATGATACTGATAGTAAGACAAAGCACTGTTTTCATGTGATTTCGTATTGACAATTAGACTATGTTTACTAA ATTTTCAGCATTGACATGATAAAATTTTCCTATAATTAATCATAATAGAAATGATAAATTATGAAGTACTTTCTGTGACT ATAACAGAAGGTATTGAATCACTCAGAGAAAGAAAGGCAAATTTATTGTTAACTATCATGCTTTTACTGATTTTCTCACC TTTCAAGGACTAAAATTGATTAAATTATGTTCCCATGTGTAGCTGAAGCTGACAGTGAAATTGAACCTGCTGATACAATG CAGTTCAACTTTGAGACCATAAGAAAGGCTACAAATAACTTTTCCGACACAAATTTGCTAGGTCGAGGAGGATTTGGGCC TGTTTACAAGGTAAAATATGTGGCTACACTTTAGATATACATTAATCTACAGATTGAGGTTTTCACTATTGGCCCCTATT TATATTTACCTCAAACTGAAACATTTTCAGGGTAAGCTTTCAAATGGACTAGAAGTTGCTGTGAAAAGGTTGTCAATAAA TTCAGGACAAGGAGATACAGAGTTCAAGAACGAGGTACAGTTGGTGGCCAAGCTACAACACAGAAATTTAGTCAGGCTAC TTGGCTTCAGTTTGGAAAGAGAAGAAAAGTTACTAGTTTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTTATTTTT GGTAAGAACTTCACTGAAAATTCTATTCTGCATAATTGCTGTAGATATGGTTTAAAAATTTATATCGTGATTTGGGTTTG CAGATCCAGTTAAGCGTGCACATATGGATTGGGAAAGGCGGTATAAAATCATAGGAGGCATTGCCAAAGGCCTTCTTTAC CTTCATGAGGATTCGAGACTGCGAATTATTCACCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAGATGAATCC TAAGATAGCAGATTTTGGCATGGCAAGATTGTTTGCTGTGGATCAAACTCAAGGAAACACAAGTAGAGTTGTTGGAACGT AGTAAGTACCATGATATGAAAGCATCATTTAATTCTTTTACACAGTCCAAAATATCAAACTAAAATGGAGTAACATGTTG TGCTAATTGAGCTTGATCATATTGACATGCAGTGGATATATGGCACCTGAGTATGTAAGGGAAGGACTGTTCTCAGTGAA GTCAGATGTGTTTAGCTTTGGCGTACTTGTTCTAGAGATTGTAAGTGGCCAGAAAAATAGTAGCTTCTATAATGGAGAGT ATGTAGAGGATCTAATAAGCTTTGTAAGTCTCCTATCTCTTATTCAAAGGTTTCATAGTTAGTCTTATTTGCCTTTTGAA GTATATGATTAGGGGTGCATTTCGGTAACTGTTCGATTAAACACTAACAATAGTAAGCAAGCTAATTTATAAAGCTCAAG ACAATAAAGCCTATAAGTAAATAGTAAGTATATGTTTGGCTTCAAGTTTCCTCATCTACAGAAACACTTCTAATCTTCTC TAATGTGGTTTTTCAATTTTCATCGTCATACCATGTTTGGGTGAAATTCTTAGAAGCATTTCAGGCTGACAAAATCAAGT TGAGGCCAAAGCAAAAAGACAGAGCTTTTGAGTTAACATGAAAGTGATTTCATCTCTTCTCACAAGACATTTCTACTATT CTTTCTATAGAAATCACTTTTATAGTAAACTTGTACAAATATAGTTCACATCAGGGTTGTCAATAGCGCGCGATAGCGGC GCAATAGCGCCGCTGCGTGGCGGCGCAGAGGTTGGGCGCGACGCAGGAGGCTGTAGAGGTGTAGAAATCGCGTCGCGGTG GTAGCGGGCGCGATCGCGGCCGAAAATCGCGCGATGTGGCGTGAGGAAGAAAGATTGATGGAAAACCCTAATTTCATGGC GAAAACCCGAAATTGCCCCCAGTTTTAAACATTAGGTTAAAAAATTTAAGGGCATTTTGGAGTTTTCCTATCTTTAATGA AACACTGTGTTTCACTCTGTACAATAAAAACCCTGCGAAGGAAAACACCAAATTGCCCCCAGATCTAAACAATCCTTTGA AATTTCAAGGGCATTTTGGGGTTTTTGCAGCACTAATGAAACACATCGTTTTGTCTTTCTTCTACCTTCAGCCTCTGCAA TCTTCTCCCTTTTTTTTTCACGATGAAACCTGTGATTTCAGCCTCCTTCTTCCTCCTTCCTCCTCCTCCTCCTTCCTCCT CCTTCTTCAGCGTAGCGGCCATAGCGCTACACGCTATAGCGCTATAGCGTTTTTTGGCCTTGCCGCTACGCGACGCTATC CGCCATTGACAACACTGGTTCACATCACTTTCAACTCACTTTTACCCTAATCAATTTGCTCAAAATCAATTCTATCCAAA ACTATTTCTACCAACGCTAAACCAAACATGCAAGTTATTTTTTATAAGCCAAATGCTAGCTTAAGCGCTTATATATGACA TAGGCTAAAAAACACTTCTCCAAAAGCCAAATGCACCCTAGATTTTATGTATAACTATTAACTAGTCCAGATAAAATGAG AGAAGTTGATATGTGAACTAACCTTTTATTGCAATTGCATCCTTTCAGGCCTGGAAAAGCTGGAAGGAGGGAACAGCATC AAATCTTGTGGATCCTACATTGGTTAATGGCTCAAGAAATGAAATAATGAGATGCATCCACATTGGTTTACTATGTGTTC AAGGAAACTTAGCTGACAGACCAACCATGGCTGTTGTTGTGCTCATGCTTAACAGCTACTCACTCACTCTCCCAGTACCT GCAGAGCCTGCATTTTTCATGAACAGCAGAGGCTTGTCAGATATTCAGTCATGGGAGGAAGATGATTCAGGGACAACAAC ATAGTCAATAAAATCTGTTGTTAGAGTGTATATCAGCATACTAATGTATATTAGAGAATGAATTATATGTGCATGAAAAA CGTTTCGTTTAATTCTTACAAAAAATATTTGAAGAAATAAATTACAAAAAAAATTTAATCGACTCTGCTGGGGATCGAAC CCAGAATCTCTGGTTCCGTAGACCAGCGCCTTATCCATTGGGCCACAGAGTCCTATGTTGAGATAAACTTGAAAGTTTAT ATTATTAAAATGTAAAAGAGTGAAAGCTATTTACAAGGACGACAAAAAAGAAAAACGACTCTGCTGGGGATCGAACCCAG AATCTCTGGTTCCGTAGACCAGCGCCTTATCCATTGGGCCACAGAGTC
CDS sequence (LotjaGi4g1v0397500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACCTTCAAGAGTTTTTTCCCTTCTTTGTCTCCTTGTCATACTTACATCTCACACCAATGCCCAGCCAAGCTTCTT GTACCATTTCTGCATGAATGATAAAGGCAACTACACTGAAAACAGCACCTACAAGACCAACCTCAACACCCTCTTATCAT CTCTTTCTTCCAACACACAAATTGATTATGGCTTCTACAATTTCTCTGAAGGCCAAAACTCTGACAAAGTTAACGCAATT GGGATGTGTAGAGGAGATGTTCAGCCAGAAACATGCCGCAGTTGCCTCAATGATTCAAGAGTCCTTCTCACGCAGCGTTG TCCAAACCAGAAAGAGGCTATTGGCTGGTATGATAACTGCATGTTGCGGTACTCAAACCGTTCAATATTTTCTGTCATGG AACCTCAACCTACATACTATTTGTGGACACAGAGCAATGCAAGTGATGTGGATCAGTTCAATCAAGTGCTTCAGGACTTG GTGGGAAGTTTGAGAAGTGAAGCTGCATCTGGTGATTCTCTTAAGAAGTATGCTGCAGGAAATGCAGCAGGGCCAAGCTT TCAAACTATATTTGCTCTTCTGCAATGCACTCCTGATTTGTCAGAGCAAGAGTGCAATGATTGCTTGGTGGAGGCTATCT CAGATATCTCAAGTTGTTGTGCTGGCAAGACAAGTGGGAGGATTGGAAAACCAAGCTGCAATCTTAGATTTGATACTTCA CCCTTCTATGACTCTACTACAACTGATGCCTCTCCTCCATCACAATCACAAGTACCTCCTCCAGGCGCAAATAATACTTC CACAAAAGGAAATAACAACACAACACGAATTGTCATTGCGGTAGTTGTGCCAATTGTAGTCATCACTGTACTGGTCATAT CTGTGTGCATCTTCTTAAGAGCAAGGAAGCAAAGGAGACATATTGATGATACTGATACTGAAGCTGACAGTGAAATTGAA CCTGCTGATACAATGCAGTTCAACTTTGAGACCATAAGAAAGGCTACAAATAACTTTTCCGACACAAATTTGCTAGGTCG AGGAGGATTTGGGCCTGTTTACAAGGGTAAGCTTTCAAATGGACTAGAAGTTGCTGTGAAAAGGTTGTCAATAAATTCAG GACAAGGAGATACAGAGTTCAAGAACGAGGTACAGTTGGTGGCCAAGCTACAACACAGAAATTTAGTCAGGCTACTTGGC TTCAGTTTGGAAAGAGAAGAAAAGTTACTAGTTTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTTATTTTTGATCC AGTTAAGCGTGCACATATGGATTGGGAAAGGCGGTATAAAATCATAGGAGGCATTGCCAAAGGCCTTCTTTACCTTCATG AGGATTCGAGACTGCGAATTATTCACCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGAGATGAATCCTAAGATA GCAGATTTTGGCATGGCAAGATTGTTTGCTGTGGATCAAACTCAAGGAAACACAAGTAGAGTTGTTGGAACGTATGGATA TATGGCACCTGAGTATGTAAGGGAAGGACTGTTCTCAGTGAAGTCAGATGTGTTTAGCTTTGGCGTACTTGTTCTAGAGA TTGTAAGTGGCCAGAAAAATAGTAGCTTCTATAATGGAGAGTATGTAGAGGATCTAATAAGCTTTGCCTGGAAAAGCTGG AAGGAGGGAACAGCATCAAATCTTGTGGATCCTACATTGGTTAATGGCTCAAGAAATGAAATAATGAGATGCATCCACAT TGGTTTACTATGTGTTCAAGGAAACTTAGCTGACAGACCAACCATGGCTGTTGTTGTGCTCATGCTTAACAGCTACTCAC TCACTCTCCCAGTACCTGCAGAGCCTGCATTTTTCATGAACAGCAGAGGCTTGTCAGATATTCAGTCATGGGAGGAAGAT GATTCAGGGACAACAACATAG
Protein sequence (LotjaGi4g1v0397500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTPSRVFSLLCLLVILTSHTNAQPSFLYHFCMNDKGNYTENSTYKTNLNTLLSSLSSNTQIDYGFYNFSEGQNSDKVNAI GMCRGDVQPETCRSCLNDSRVLLTQRCPNQKEAIGWYDNCMLRYSNRSIFSVMEPQPTYYLWTQSNASDVDQFNQVLQDL VGSLRSEAASGDSLKKYAAGNAAGPSFQTIFALLQCTPDLSEQECNDCLVEAISDISSCCAGKTSGRIGKPSCNLRFDTS PFYDSTTTDASPPSQSQVPPPGANNTSTKGNNNTTRIVIAVVVPIVVITVLVISVCIFLRARKQRRHIDDTDTEADSEIE PADTMQFNFETIRKATNNFSDTNLLGRGGFGPVYKGKLSNGLEVAVKRLSINSGQGDTEFKNEVQLVAKLQHRNLVRLLG FSLEREEKLLVYEFVPNKSLDYFIFDPVKRAHMDWERRYKIIGGIAKGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKI ADFGMARLFAVDQTQGNTSRVVGTYGYMAPEYVREGLFSVKSDVFSFGVLVLEIVSGQKNSSFYNGEYVEDLISFAWKSW KEGTASNLVDPTLVNGSRNEIMRCIHIGLLCVQGNLADRPTMAVVVLMLNSYSLTLPVPAEPAFFMNSRGLSDIQSWEED DSGTTT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Gene3D | 22 | 129 | 108 | 1.4E-25 | ||
| Phobius | 23 | 276 | 254 | - | – | |
| ProSiteProfiles | 26 | 129 | 104 | 19.92 | ||
| Pfam | 31 | 126 | 96 | 5.0E-23 | ||
| PANTHER | 39 | 621 | 583 | 4.0E-146 | – | |
| PANTHER | 39 | 621 | 583 | 4.0E-146 | – | |
| ProSiteProfiles | 135 | 242 | 108 | 21.775 | ||
| Gene3D | 135 | 242 | 108 | 4.2E-27 | ||
| Pfam | 146 | 239 | 94 | 3.3E-13 | ||
| MobiDBLite | 244 | 270 | 27 | - | – | |
| Pfam | 254 | 318 | 65 | 3.9E-8 | ||
| Phobius | 277 | 299 | 23 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 300 | 646 | 347 | - | – | |
| Gene3D | 300 | 414 | 115 | 2.5E-38 | – | |
| SUPERFAMILY | 324 | 636 | 313 | 1.75E-79 | ||
| ProSiteProfiles | 339 | 613 | 275 | 37.616 | ||
| SMART | 339 | 613 | 275 | 1.9E-25 | ||
| Pfam | 343 | 556 | 214 | 5.8E-45 | ||
| CDD | 345 | 610 | 266 | 2.47578E-93 | – | |
| Gene3D | 415 | 616 | 202 | 2.6E-56 | – | |
| ProSitePatterns | 460 | 472 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0397500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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