Domain Predictions — View

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IPR033249

Source: InterPro

Description

IPR033249 is a CLAVATA3/ESR (CLE)-related protein, plant.

<p>This entry represents a group of the CLAVATA3/ESR (CLE)-related proteins, including CLE 16/17/21/22 from Arabidopsis. They are extracellular signal peptides that regulate cell fate [[cite:PUB00078257]]. They may act as suppressors of plant stem cell differentiation [[cite:PUB00078258]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0048731 View details of GO:0048731 AmiGO InterPro QuickGO	Biological process	System development	The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.	Subterm of GO:0048856 Part of GO:0007275

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0005899.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLE18 protein [Glycine max] gi\|321172976\|gb\|ADW77272.1\|	Domains IPR033249 NON_CYTOPLASMIC_DOMAIN PTHR34545 PTHR34545:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix mobidb-lite	10
Lj1g3v4106880.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLE06 protein [Glycine max] gi\|321172952\|gb\|ADW77260.1\|	Domains CYTOPLASMIC_DOMAIN IPR033249 NON_CYTOPLASMIC_DOMAIN PTHR34545 PTHR34545:SF3 TMhelix TRANSMEMBRANE mobidb-lite	8
Lj4g3v0643890.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLE08 protein [Glycine max] gi\|321172956\|gb\|ADW77262.1\|	Domains CYTOPLASMIC_DOMAIN IPR033249 NON_CYTOPLASMIC_DOMAIN PTHR34545 PTHR34545:SF2 TMhelix TRANSMEMBRANE	7
LotjaGi2g1v0146200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	CLAVATA3/ESR (CLE)-related protein 22; TAIR: AT3G15010.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp\|B0UYF2\|S7A14_DANRE Probable cationic amino acid transporter; TrEMBL-Plants: tr\|V7BJG9\|V7BJG9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0146200_LC	Domains CYTOPLASMIC_DOMAIN IPR033249 NON_CYTOPLASMIC_DOMAIN PTHR34545 PTHR34545:SF1 TMhelix TRANSMEMBRANE	7
LotjaGi4g1v0081800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Clavata3/ESR (CLE) gene family member; TAIR: AT1G70895.1 CLAVATA3/ESR-RELATED 17; Swiss-Prot: sp\|Q8L9H6\|CLE17_ARATH CLAVATA3/ESR (CLE)-related protein 17; TrEMBL-Plants: tr\|A0A193PF82\|A0A193PF82_LOTJA CLAVATA3/ESR-related 42; Found in the gene: LotjaGi4g1v0081800	Domains CYTOPLASMIC_DOMAIN IPR033249 NON_CYTOPLASMIC_DOMAIN PTHR34545 PTHR34545:SF7 TMhelix TRANSMEMBRANE	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	20.00