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IPR034146 is a snRNP35, RNA recognition motif.
<p>This entry represents the RNA recognition motif (RRM) of snRNP35 (also known as U11/U12-35K), which is one of the components of the U11/U12 snRNP, a spliceosome required for splicing U12-type nuclear pre-mRNA introns [[cite:PUB00082764], [cite:PUB00082765]].</p> <p>U11/U12-35K is highly conserved among bilateria and plants, but is lacking in some organisms, such as Saccharomyces cerevisiae and Caenorhabditis elegans. Moreover, U11/U12-35K shows significant sequence similarity to U1 snRNP-specific 70kDa protein (U1-70K or snRNP70) [[cite:PUB00082763]].</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | RNA-binding family protein; TAIR: AT2G43370.1 RNA-binding (RRM/RBD/RNP motifs) family protein; Swiss-Prot: sp|Q8VY74|U1135_ARATH U11/U12 small nuclear ribonucleoprotein 35 kDa protein; TrEMBL-Plants: tr|I1KZM1|I1KZM1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0548900 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 100.00 |