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IPR036433 is a Elongation factor EF1B gamma, C-terminal domain superfamily.
<p>Translation elongation factors are responsible for two main processes during protein synthesis on the ribosome [[cite:PUB00033953], [cite:PUB00033952], [cite:PUB00033951]]. EF1A (or EF-Tu) is responsible for the selection and binding of the cognate aminoacyl-tRNA to the A-site (acceptor site) of the ribosome. EF2 (or EF-G) is responsible for the translocation of the peptidyl-tRNA from the A-site to the P-site (peptidyl-tRNA site) of the ribosome, thereby freeing the A-site for the next aminoacyl-tRNA to bind. Elongation factors are responsible for achieving accuracy of translation and both EF1A and EF2 are remarkably conserved throughout evolution.</p> <p>Elongation factor EF1B (also known as EF-Ts or EF-1beta/gamma/delta) is a nucleotide exchange factor that is required to regenerate EF1A from its inactive form (EF1A-GDP) to its active form (EF1A-GTP). EF1A is then ready to interact with a new aminoacyl-tRNA to begin the cycle again. EF1B is more complex in eukaryotes than in bacteria, and can consist of three subunits: EF1B-alpha (or EF-1beta), EF1B-gamma (or EF-1gamma) and EF1B-beta (or EF-1delta) [[cite:PUB00033953]].</p> <p>This entry represents a conserved domain superfamily. This domain is usually found near the C terminus of EF1B-gamma chains, a peptide of 410-440 residues. The gamma chain appears to play a role in anchoring the EF1B complex to the beta and delta chains and to other cellular components.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Translation elongation factor activity | Functions in chain elongation during polypeptide synthesis at the ribosome. | ||
Biological process | Translational elongation | The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr|I1MQS6|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900 | 28 | ||
– | Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr|I1MQS6|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900 | 27 | ||
– | Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp|Q6YW46|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr|I1MQS6|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900 | 28 | ||
– | Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp|Q9FUM1|EF1G_PRUAV Elongation factor 1-gamma; TrEMBL-Plants: tr|A0A0B2P7M4|A0A0B2P7M4_GLYSO Elongation factor 1-gamma; Found in the gene: LotjaGi5g1v0177900 | 28 | ||
– | Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp|Q9FUM1|EF1G_PRUAV Elongation factor 1-gamma; TrEMBL-Plants: tr|A0A0B2P7M4|A0A0B2P7M4_GLYSO Elongation factor 1-gamma; Found in the gene: LotjaGi5g1v0177900 | 28 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 20.00 |