Domain Predictions — View

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PS50040

Source: ProSiteProfiles

Description

Elongation factor 1 (EF-1) gamma C-terminal domain profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003746 View details of GO:0003746 AmiGO InterPro QuickGO	Molecular function	Translation elongation factor activity	Functions in chain elongation during polypeptide synthesis at the ribosome.	Subterm of GO:0008135
GO:0006414 View details of GO:0006414 AmiGO InterPro QuickGO	Biological process	Translational elongation	The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.	Subterm of GO:0034645 Part of GO:0006412

Associated Lotus transcripts 7

Transcript	Name	Description	Predicted domains	Domain count
Lj2g3v2414950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor 1-gamma-like [Vitis vinifera] gi\|225465198\|ref\|XP_002264400.1\|	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR012336 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR11260 PTHR11260:SF194 SM01183 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	23
Lj4g3v3113460.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma [Glycine max] gi\|351722398\|ref\|NP_001235707.1\|	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR012336 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR11260 PTHR11260:SF194 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	22
LotjaGi4g1v0458900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp\|Q6YW46\|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr\|I1MQS6\|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR036249 IPR036282 IPR036433 IPR040079 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR44372 PTHR44372:SF2 SFLDG00358 SFLDS00019 SM01183 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	28
LotjaGi4g1v0458900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp\|Q6YW46\|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr\|I1MQS6\|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR036249 IPR036282 IPR036433 IPR040079 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR44372 PTHR44372:SF2 SFLDG00358 SFLDS00019 SM01183 SSF47616 SSF52833 SSF89942 cd03181 mobidb-lite	27
LotjaGi4g1v0458900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp\|Q6YW46\|EF1G2_ORYSJ Elongation factor 1-gamma 2; TrEMBL-Plants: tr\|I1MQS6\|I1MQS6_SOYBN EF1Bgamma class glutathione S-transferase; Found in the gene: LotjaGi4g1v0458900	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR036249 IPR036282 IPR036433 IPR040079 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR44372 PTHR44372:SF2 SFLDG00358 SFLDS00019 SM01183 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	28
LotjaGi5g1v0177900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp\|Q9FUM1\|EF1G_PRUAV Elongation factor 1-gamma; TrEMBL-Plants: tr\|A0A0B2P7M4\|A0A0B2P7M4_GLYSO Elongation factor 1-gamma; Found in the gene: LotjaGi5g1v0177900	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR036249 IPR036282 IPR036433 IPR040079 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR44372 PTHR44372:SF2 SFLDG00358 SFLDS00019 SM01183 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	28
LotjaGi5g1v0177900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor 1-gamma; TAIR: AT1G09640.1 Translation elongation factor EF1B, gamma chain; Swiss-Prot: sp\|Q9FUM1\|EF1G_PRUAV Elongation factor 1-gamma; TrEMBL-Plants: tr\|A0A0B2P7M4\|A0A0B2P7M4_GLYSO Elongation factor 1-gamma; Found in the gene: LotjaGi5g1v0177900	Domains G3DSA:1.20.1050.10 G3DSA:3.30.70.1010 G3DSA:3.40.30.10 IPR001662 IPR004045 IPR004046 IPR010987 IPR036249 IPR036282 IPR036433 IPR040079 PF00043 PF00647 PF02798 PS50040 PS50404 PS50405 PTHR44372 PTHR44372:SF2 SFLDG00358 SFLDS00019 SM01183 SSF47616 SSF52833 SSF89942 cd03044 cd03181 mobidb-lite	28

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	14.29