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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0501700 |
Transcript ID | LotjaGi3g1v0501700.1 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Purple acid phosphatase; TAIR: AT3G01120.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|P21885|SPEA_BACSU Arginine decarboxylase; TrEMBL-Plants: tr|I1LQA4|I1LQA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501700 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92016181..92019145) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGATGAAATTTAGCATCTGAAAAATTAAAGAGAAGCATGTCTTTTTTTGGATAAACCCGCCGTAAGATTATTTTCAG CTAGCCATCCAGCAACCAGAGAACCGGAGAAGGTGGAAGGAAATGATATCCCCTTCACTCTCCCTCTCACTCTCAGTCCC TTGCAATCCAAAACCGCCAAAATGGTTTTTCAACTTCAGTTTCAGGCCTTCGCCCACAGTTCCCCTTCATTGCTCTCAGG TTCCCTTTCCTTTCCATTGCTTAGATTTTTCTTAAAATTTTGTTAATAAAATAAAATTGATTACAGCTTTAGTATCTCAA AATTGAAATTGTGAAACTCACACTTATTTGATCATAAATAATTTTAGTTTAATTGAGGTGGGTAATGAAAAATAGCTCTA GCCAGGTCTGAATTGAACTGAAATGTCAATTTTCCATTACTACTTTCTCATTTTGAATTTGGCCTACAAGTCCCATCACT CTGTTGAATTTTTATCAGGCAGTGAGTTTTTTTAGTCTCATAATATTTAAAATGTCTGGTAGGGAAGAAGCATTGCTATG CCTGCATATGACCAAGATGAGGAAACTGGGAGATTGAACACTGCATCGATCACAAATGACAATGTTTTGTGTAGTGACTC GTCATTGCTTCAGCGAAATGAGCTACCTCCTCTAGTCAGTGCATTGAAAGCATCAGCTGAACAAAACACTGCCAGTTTTC ACTTTCCTGGGCATAATAGAGGCAATGCCGCACCTGCTTCGATGGCCCGGCTCATTGGAATAAGACCATATTCTCATGAC TTGCCTGAGCTTCCAGAGCTTGACAACCTCTTTTGCCCCCAGGGGCCCATATTGGAAGCGCAGAAAGAAGCAGCCAAACT GTTCGGATCGTCGGAGACGTGGTTTCTTGTTGGAGGTACTACTTGTGGGATCCAGGCAGCAATAATGGCCACTTGTTCAC CGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTGTCAGCTATATCTGCTATGGTATTATCTGGTGCAGTGCCTAAG TACATCGTTCCTGACTATAAGAATGATTGGGACATCGCCGGTGGTGTCACTGCATTACAGGTGATTCAACTTTGTTTCTA AATTTGTAAAAGTTTGCTGATAATATTTTTTGGCATGACAGCAATTGATATGAACATAATTGTGTATTCATTCCAAATGG AATCTAAATAGGTTTTCCAACTCTTACTCCGAAGATGAGTTTTTGTTCTGGATTTCTGATTTGTACTGTCCTCAATGTTG TTCTCACCTTTTTTTTCTGAATGTTGGATGACTGGATGTTGTTGCAGGTATTGAAAGCTATGCAGGAACTAGAAAAGGAA GGGAAAAAAGCAGCAGCTGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTGACTTGAGCGAGATTTCGGAGTT GTGTCATTCTCATAAAATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATCTAGGATTTCATTCTGAACTACCTAACT CTGCCCTCCAGCAAGGGGCTGATCTGGCTGTACAGTCTACTCACAAAGTCCTGTGCTCTCTTACTCAATCATCTATGCTT CACATGTCAGGTGATATTGTAGATAAGGAAAAAATTTCTAGATGTCTCCAAACTCTTCAAACCACAAGCCCTAGTTATCT GCTTTTGGCATCCCTAGATGCTGCTAGAGCACAACTTAGTGAAAGCCCTGATACGGCATTCAACCACGCAATCAAATTAG CCCGTGAAGCAAAGTGCCAGCTAAAACAAATCCCTGGTATCTCAGTGCTTGAGAATTCAAGCTTTCCAGCCTTTCCTGGT ACTGATCCACTGCGGCTTACTGTAGGGTTTTGGAAGCTTGGTTTATCAGGTTATGAAGCTGATGAAATCTTATACAGTGA TTACGGAATCGTCTGTGAACTTGTTGGGAATAAGTCTATCACTTATGCCCTTAATCTTGGAACTCGTCGCAACCACGTCG AAAGGCTACTATTGGGAATAAAGCATCTAGCTGCAGCATATTTTTCCACTCGGCAACCTGAAGAAAGAGTGCTCACTACT GGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTAAAAGAAAAGTAACATT GAAGGAGAGCATTGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCAGGCATACCGGTATTGATCCCTGGTGAGG TTATTACCGACAAAGCTGCTGATTATCTACTTCATGTCAGGAGTAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTCT CTTTCTTCTGTAGTTGTTTGCAATGTATAGTGAAAACAATTGAGGAGAAGAAGTACCCTGAAGTTAAAACTTCCCAAGTG CCCTTTTTGCGTCACGCCAGAAGGTTATAACTTCTGATAGACTTCACTCAGCTGGGGAAATTTGTAGTTAGTTAGTCTAT ACTCTATAGTAATGGCTGTTCAACTTAGTTACTTTCCTCTCATTTTGATGGTTTAAAATTAAAATGGAGGGGTTGTTCAG AAAAAATTTCCTCTTGAAAATGCTACCAGATTCGGATGCTTTAGAGATATAGTTAAGAGTCAGAAGAATATGGCTACAAG CAAACCAGGATGTAGCCATAAAAAAATGAGAACTACTTTGATGTATAAGTATATATTTAGTTGATAGATTTACTGAATGT TAGACAAGAATAGGAAGGATTAGTTAATCATTTCTTGTAGGAGATATACGATGTACACTGTTTCATGATTTGTACACGCC ATTCTATGGTTACTGGAAAAGTCAATTTTTGAGGAGTCAATGCCGGATACCTGCAATCACTGCAGGGTATAGATGATCAT CTTGGTCCTTACTACTTGTTTCTGTTTTCATTTGTCAAAATTAAATAGTCGTTTGGAATATAAATTTCAACTTTTAATTT TCTAG
CDS sequence (LotjaGi3g1v0501700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGCATATGACCAAGATGAGGAAACTGGGAGATTGAACACTGCATCGATCACAAATGACAATGTTTTGTGTAGTGA CTCGTCATTGCTTCAGCGAAATGAGCTACCTCCTCTAGTCAGTGCATTGAAAGCATCAGCTGAACAAAACACTGCCAGTT TTCACTTTCCTGGGCATAATAGAGGCAATGCCGCACCTGCTTCGATGGCCCGGCTCATTGGAATAAGACCATATTCTCAT GACTTGCCTGAGCTTCCAGAGCTTGACAACCTCTTTTGCCCCCAGGGGCCCATATTGGAAGCGCAGAAAGAAGCAGCCAA ACTGTTCGGATCGTCGGAGACGTGGTTTCTTGTTGGAGGTACTACTTGTGGGATCCAGGCAGCAATAATGGCCACTTGTT CACCGGGAGAATTTCTGATTCTTCCTAGGAATTGTCATTTGTCAGCTATATCTGCTATGGTATTATCTGGTGCAGTGCCT AAGTACATCGTTCCTGACTATAAGAATGATTGGGACATCGCCGGTGGTGTCACTGCATTACAGGTATTGAAAGCTATGCA GGAACTAGAAAAGGAAGGGAAAAAAGCAGCAGCTGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTGACTTGA GCGAGATTTCGGAGTTGTGTCATTCTCATAAAATTCCTTTGATTGTTGATGAAGCTCATGGTGCACATCTAGGATTTCAT TCTGAACTACCTAACTCTGCCCTCCAGCAAGGGGCTGATCTGGCTGTACAGTCTACTCACAAAGTCCTGTGCTCTCTTAC TCAATCATCTATGCTTCACATGTCAGGTGATATTGTAGATAAGGAAAAAATTTCTAGATGTCTCCAAACTCTTCAAACCA CAAGCCCTAGTTATCTGCTTTTGGCATCCCTAGATGCTGCTAGAGCACAACTTAGTGAAAGCCCTGATACGGCATTCAAC CACGCAATCAAATTAGCCCGTGAAGCAAAGTGCCAGCTAAAACAAATCCCTGGTATCTCAGTGCTTGAGAATTCAAGCTT TCCAGCCTTTCCTGGTACTGATCCACTGCGGCTTACTGTAGGGTTTTGGAAGCTTGGTTTATCAGGTTATGAAGCTGATG AAATCTTATACAGTGATTACGGAATCGTCTGTGAACTTGTTGGGAATAAGTCTATCACTTATGCCCTTAATCTTGGAACT CGTCGCAACCACGTCGAAAGGCTACTATTGGGAATAAAGCATCTAGCTGCAGCATATTTTTCCACTCGGCAACCTGAAGA AAGAGTGCTCACTACTGGTCATGCACCCTTTGATGATATAATCATGAGTTTGATCCCTAGAGATGCCTTTTTTGCAAGTA AAAGAAAAGTAACATTGAAGGAGAGCATTGGTGAGGTTTCAGGGGAGCTTATATGTCCATACCCTCCAGGCATACCGGTA TTGATCCCTGGTGAGGTTATTACCGACAAAGCTGCTGATTATCTACTTCATGTCAGGAGTAAAGGTGCTGATATTAGTGG AGCATCTGATCCCTCTCTTTCTTCTGTAGTTGTTTGCAATGTATAG
Protein sequence (LotjaGi3g1v0501700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPAYDQDEETGRLNTASITNDNVLCSDSSLLQRNELPPLVSALKASAEQNTASFHFPGHNRGNAAPASMARLIGIRPYSH DLPELPELDNLFCPQGPILEAQKEAAKLFGSSETWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLSAISAMVLSGAVP KYIVPDYKNDWDIAGGVTALQVLKAMQELEKEGKKAAAVFITSPTYHGICSDLSEISELCHSHKIPLIVDEAHGAHLGFH SELPNSALQQGADLAVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQTTSPSYLLLASLDAARAQLSESPDTAFN HAIKLAREAKCQLKQIPGISVLENSSFPAFPGTDPLRLTVGFWKLGLSGYEADEILYSDYGIVCELVGNKSITYALNLGT RRNHVERLLLGIKHLAAAYFSTRQPEERVLTTGHAPFDDIIMSLIPRDAFFASKRKVTLKESIGEVSGELICPYPPGIPV LIPGEVITDKAADYLLHVRSKGADISGASDPSLSSVVVCNV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 13 | 520 | 508 | 2.0E-238 | – | |
PANTHER | 13 | 520 | 508 | 2.0E-238 | – | |
Pfam | 37 | 336 | 300 | 3.5E-68 | ||
Gene3D | 37 | 317 | 281 | 1.0E-107 | ||
SUPERFAMILY | 37 | 413 | 377 | 1.06E-83 | ||
CDD | 38 | 335 | 298 | 6.3205E-128 | ||
SUPERFAMILY | 375 | 519 | 145 | 8.24E-29 | ||
Pfam | 455 | 501 | 47 | 8.8E-9 | ||
Gene3D | 457 | 512 | 56 | 1.4E-17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi3g1v0501700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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