Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR038526

Source: InterPro

Description

IPR038526 is a Large ribosomal subunit protein eL22 superfamily.

<p>Ribosomal protein eL22 forms part of the 60S ribosomal subunit [[cite:PUB00000194]] found in eukaryotes. Rattus norvegicus (Rat) eL22 is related to ribosomal proteins from other eukaryotes and is identical in amino acid sequence to human EAP, the EBER 1 (Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) encoded RNA) associated protein [[cite:PUB00006313]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 6

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0770000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3T846\|I3T846_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0770000	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6
LotjaGi1g1v0770000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3T846\|I3T846_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0770000	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6
LotjaGi5g1v0225200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3T8K2\|I3T8K2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0225200	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6
LotjaGi5g1v0225200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3T8K2\|I3T8K2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0225200	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6
LotjaGi5g1v0250300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3SBV7\|I3SBV7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250300	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6
LotjaGi5g1v0250300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	60S ribosomal protein L22, putative; TAIR: AT3G05560.1 Ribosomal L22e protein family; Swiss-Prot: sp\|Q9M9W1\|RL222_ARATH 60S ribosomal protein L22-2; TrEMBL-Plants: tr\|I3SBV7\|I3SBV7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0250300	Domains G3DSA:3.30.1360.210 IPR002671 IPR038526 PF01776 PTHR10064 PTHR10064:SF19	6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
PTHR10064:SF19	PANTHER	1	16.67