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IPR038909

Source: InterPro

Description

IPR038909 is a Protein effector of transcription.

<p>Effectors of transcription (ETs) are plant-specific regulatory proteins characterized by the presence of two to five C-terminal DNA- and Zn-binding repeats, and a highly conserved cysteine pattern. There are three ETs in Arabidopsis thaliana. AtET2 plays a role in the regulation of plant hormone GA (gibberellin) and cell-cycle-related protein GASA4 [[cite:PUB00088546], [cite:PUB00088544]]. Regulation of GA response has also been observed in Brassica napus ET, and could be a conserved feature of these proteins [[cite:PUB00088545]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Associated Lotus transcripts 1

Transcript Name Description Predicted domains Domain count
LotjaGi2g1v0231600.1
– Effector of transcription protein; TAIR: AT5G56780.1 effector of transcription2; Swiss-Prot: sp|F4K933|ET2_ARATH Protein EFFECTOR OF TRANSCRIPTION 2; TrEMBL-Plants: tr|A0A151RGM0|A0A151RGM0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0231600
Domains
5

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SM00465 SMART 1 100.00